FFCP PHASE1:Hg19::chr19:4182504..4182521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51548 | |EntrezGene=51548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14934 | |HGNC=14934 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDV3 | |UniProt=B4DDV3 | ||
|association_with_transcript=40bp_to_ENST00000381935_5end | |association_with_transcript=40bp_to_ENST00000381935_5end | ||
|cluster_id=chr19:4182504..4182521,- | |||
|description=CAGE_peak_2_at_SIRT6_5end | |description=CAGE_peak_2_at_SIRT6_5end | ||
|id=chr19:4182504..4182521,- | |id=chr19:4182504..4182521,- | ||
|ontology_enrichment_celltype=CL:0000548!2.88e-24!679;CL:0000004!2.88e-24!679;CL:0000255!2.88e-24!679;CL:0000012!2.03e-23!682;CL:0000144!4.78e-20!625;CL:0002371!3.81e-19!591;CL:0000003!7.96e-17!722;CL:0000063!8.65e-12!578;CL:0000055!5.30e-10!180;CL:0002321!1.01e-09!248;CL:0000220!1.10e-09!246;CL:0000222!1.96e-08!119;CL:0000359!2.12e-07!32;CL:0000066!6.71e-07!254 | |ontology_enrichment_celltype=CL:0000548!2.88e-24!679;CL:0000004!2.88e-24!679;CL:0000255!2.88e-24!679;CL:0000012!2.03e-23!682;CL:0000144!4.78e-20!625;CL:0002371!3.81e-19!591;CL:0000003!7.96e-17!722;CL:0000063!8.65e-12!578;CL:0000055!5.30e-10!180;CL:0002321!1.01e-09!248;CL:0000220!1.10e-09!246;CL:0000222!1.96e-08!119;CL:0000359!2.12e-07!32;CL:0000066!6.71e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000449;9.92e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.35e-09,250;CL:0000222,1.10e-08,121;CL:0000359,3.73e-07,32;CL:1000449,7.75e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.51e-09!42;UBERON:0003509!1.51e-09!42;UBERON:0004572!1.51e-09!42;UBERON:0004573!1.62e-07!33;UBERON:0004571!1.62e-07!33;UBERON:0001981!1.90e-07!60;UBERON:0007500!1.90e-07!60;UBERON:0004537!1.90e-07!60;UBERON:0006965!1.90e-07!60;UBERON:0004872!5.90e-07!84;UBERON:0002049!6.06e-07!79;UBERON:0007798!6.06e-07!79;UBERON:0000055!8.84e-07!69 | |ontology_enrichment_uberon=UBERON:0001637!1.51e-09!42;UBERON:0003509!1.51e-09!42;UBERON:0004572!1.51e-09!42;UBERON:0004573!1.62e-07!33;UBERON:0004571!1.62e-07!33;UBERON:0001981!1.90e-07!60;UBERON:0007500!1.90e-07!60;UBERON:0004537!1.90e-07!60;UBERON:0006965!1.90e-07!60;UBERON:0004872!5.90e-07!84;UBERON:0002049!6.06e-07!79;UBERON:0007798!6.06e-07!79;UBERON:0000055!8.84e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.92e-07;15!UBERON:0004819;9.92e-07;15!UBERON:0001285;9.92e-07;15!UBERON:0007684;9.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.76e-10,42;UBERON:0003509,4.76e-10,42;UBERON:0004572,4.76e-10,42;UBERON:0007500,2.41e-08,59;UBERON:0001981,2.41e-08,59;UBERON:0004537,2.41e-08,59;UBERON:0006965,2.41e-08,59;UBERON:0002049,6.20e-08,78;UBERON:0007798,6.20e-08,78;UBERON:0004573,6.89e-08,33;UBERON:0004571,6.89e-08,33;UBERON:0000055,7.27e-08,68;UBERON:0004872,8.60e-08,83;UBERON:0003914,3.27e-07,117;UBERON:0004211,7.75e-07,15;UBERON:0009773,7.75e-07,15;UBERON:0001231,7.75e-07,15;UBERON:0001285,7.75e-07,15;UBERON:0007684,7.75e-07,15;UBERON:0004208,7.75e-07,15 | |||
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| ||
|short_description=p2@SIRT6 | |short_description=p2@SIRT6 | ||
}} | }} |
Latest revision as of 04:52, 18 September 2015
Short description: | p2@SIRT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIRT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000381935_5end |
EntrezGene: | SIRT6 |
HGNC: | 14934 |
UniProt: | B4DDV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.35e-09 | 250 |
mesodermal cell | 1.10e-08 | 121 |
vascular associated smooth muscle cell | 3.73e-07 | 32 |
epithelial cell of nephron | 7.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery | 4.76e-10 | 42 |
arterial blood vessel | 4.76e-10 | 42 |
arterial system | 4.76e-10 | 42 |
epithelial tube open at both ends | 2.41e-08 | 59 |
blood vessel | 2.41e-08 | 59 |
blood vasculature | 2.41e-08 | 59 |
vascular cord | 2.41e-08 | 59 |
vasculature | 6.20e-08 | 78 |
vascular system | 6.20e-08 | 78 |
systemic artery | 6.89e-08 | 33 |
systemic arterial system | 6.89e-08 | 33 |
vessel | 7.27e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 8.60e-08 | 83 |
epithelial tube | 3.27e-07 | 117 |
nephron epithelium | 7.75e-07 | 15 |
renal tubule | 7.75e-07 | 15 |
nephron tubule | 7.75e-07 | 15 |
nephron | 7.75e-07 | 15 |
uriniferous tubule | 7.75e-07 | 15 |
nephrogenic mesenchyme | 7.75e-07 | 15 |