FFCP PHASE1:Hg19::chr15:56035356..56035367,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283659 | |EntrezGene=283659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26373 | |HGNC=26373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000561292_5end | |association_with_transcript=-68bp_to_ENST00000561292_5end | ||
|cluster_id=chr15:56035356..56035367,- | |||
|coexpression_cluster_id=C1742 | |||
|description=CAGE_peak_2_at_PRTG_5end | |description=CAGE_peak_2_at_PRTG_5end | ||
|id=chr15:56035356..56035367,- | |id=chr15:56035356..56035367,- | ||
|ontology_enrichment_celltype=CL:0000243!2.56e-10!15;CL:0000125!2.56e-10!15;CL:0000030!2.56e-10!15;CL:0000339!2.56e-10!15;CL:0000095!8.46e-09!17;CL:0000123!8.46e-09!17;CL:0002319!5.22e-08!25;CL:0002322!1.33e-07!5 | |ontology_enrichment_celltype=CL:0000243!2.56e-10!15;CL:0000125!2.56e-10!15;CL:0000030!2.56e-10!15;CL:0000339!2.56e-10!15;CL:0000095!8.46e-09!17;CL:0000123!8.46e-09!17;CL:0002319!5.22e-08!25;CL:0002322!1.33e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.71e-32;5!CL:0000039;2.71e-13;7!CL:0000586;2.71e-13;7!CL:0002321;7.10e-11;15!CL:0000148;1.38e-09;10!CL:0000147;5.51e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.29e-32,5;CL:0000039,2.34e-13,7;CL:0000586,2.34e-13,7;CL:0000148,1.11e-09,10;CL:0000541,1.11e-09,10;CL:0000147,4.72e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.00e-12!143;DOID:305!2.47e-08!106;DOID:14566!8.30e-08!239;DOID:162!1.34e-07!235 | |ontology_enrichment_disease=DOID:0050687!8.00e-12!143;DOID:305!2.47e-08!106;DOID:14566!8.30e-08!239;DOID:162!1.34e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.97e-16;22!DOID:2994;3.97e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.62e-16,22;DOID:2994,3.62e-16,22;DOID:0050687,3.44e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-11!94;UBERON:0001016!1.17e-11!94;UBERON:0005743!9.31e-10!86;UBERON:0001017!1.66e-08!82;UBERON:0004121!2.02e-07!169;UBERON:0000924!6.31e-07!173;UBERON:0006601!6.31e-07!173;UBERON:0003076!9.11e-07!15;UBERON:0003057!9.11e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.446498641420399,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.21973706129595,0.530119073285941,1.74290914304278,4.04278114559945,1.26160425437814,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0.422250816255987,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,1.61394733071642,0.807818799687949,1.08647371922008,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,1.13082457147153,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0.30607276163049,0.31593289814244,0.150323419414493,0,0,0.330991955875499,0,0,1.13843818411917,0,0,0,0,0.17472666824203,0.171986032471617,0.290268993867255,0,0.328461828212837,0,0.353024506766001,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0.144090417154106,0.458146384663663,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0.551482276150566,0.494495150286999,0.808842526250219,0,0,0.795229689809303,0,0.321506296930038,0.275078873194468,0,0,0,0.303747783290123,0,0,0.314727528809989,0.211200673038813,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0.511164065356265,0.113312091520126,0,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.372578417648301,0.691743174681154,0.249960815924213,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.327628914576042,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,1.06172751012966,0,0,0,0,0,0.526472298444801,0,0,0.523813388962845,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,2.69026977775059,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,0,0,0,0.357382720883282,1.10609528212909,1.04617282831313,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0.237840181555137,0.22589216407792,1.09940516745429,0.603851374266694,0,0,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,6.18215481691887,7.4300588935313,4.68784453742317,0,1.3360870263278,0.0918948995348449,0,0.757786982182394,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0.318235791390825,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0.244209805832924,0,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.446498641420399,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.21973706129595,0.530119073285941,1.74290914304278,4.04278114559945,1.26160425437814,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,0,0,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0.422250816255987,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,1.61394733071642,0.807818799687949,1.08647371922008,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,1.13082457147153,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0.30607276163049,0.31593289814244,0.150323419414493,0,0,0.330991955875499,0,0,1.13843818411917,0,0,0,0,0.17472666824203,0.171986032471617,0.290268993867255,0,0.328461828212837,0,0.353024506766001,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0.144090417154106,0.458146384663663,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0.551482276150566,0.494495150286999,0.808842526250219,0,0,0.795229689809303,0,0.321506296930038,0.275078873194468,0,0,0,0.303747783290123,0,0,0.314727528809989,0.211200673038813,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0.511164065356265,0.113312091520126,0,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.372578417648301,0.691743174681154,0.249960815924213,0,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.327628914576042,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,1.06172751012966,0,0,0,0,0,0.526472298444801,0,0,0.523813388962845,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,2.69026977775059,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,0,0,0,0.357382720883282,1.10609528212909,1.04617282831313,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0.237840181555137,0.22589216407792,1.09940516745429,0.603851374266694,0,0,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,6.18215481691887,7.4300588935313,4.68784453742317,0,1.3360870263278,0.0918948995348449,0,0.757786982182394,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0.318235791390825,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0.244209805832924,0,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p2@PRTG | |short_description=p2@PRTG | ||
}} | }} |
Latest revision as of 04:49, 18 September 2015
Short description: | p2@PRTG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRTG_5end |
Coexpression cluster: | C1742_teratocarcinoma_H9_hepatoblastoma_pancreatic_choriocarcinoma_pineal_mesodermal |
Association with transcript: | -68bp_to_ENST00000561292_5end |
EntrezGene: | PRTG |
HGNC: | 26373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.29e-32 | 5 |
germ line cell | 2.34e-13 | 7 |
germ cell | 2.34e-13 | 7 |
melanocyte | 1.11e-09 | 10 |
melanoblast | 1.11e-09 | 10 |
pigment cell | 4.72e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.62e-16 | 22 |
germ cell cancer | 3.62e-16 | 22 |
cell type cancer | 3.44e-08 | 143 |