FFCP PHASE1:Hg19::chr15:55880566..55880639,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30256 | |||
|TSSclassifier=strong | |||
|UniProt=A7Y2D6 | |||
|association_with_transcript=-57bp_to_ENST00000401688_5end | |||
|cluster_id=chr15:55880566..55880639,- | |||
|description=CAGE_peak_1_at_PYGO1_5end | |||
|id=chr15:55880566..55880639,- | |||
|ontology_enrichment_celltype=CL:0000055!9.32e-21!180;CL:0000057!4.68e-13!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.68e-13,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.19e-16!94;UBERON:0001016!7.19e-16!94;UBERON:0000481!1.25e-15!347;UBERON:0005743!2.87e-15!86;UBERON:0001017!8.35e-15!82;UBERON:0000475!9.79e-15!365;UBERON:0007023!2.87e-14!115;UBERON:0000924!3.21e-14!173;UBERON:0006601!3.21e-14!173;UBERON:0004121!5.25e-14!169;UBERON:0002346!2.25e-13!90;UBERON:0001049!2.60e-13!57;UBERON:0005068!2.60e-13!57;UBERON:0006241!2.60e-13!57;UBERON:0007135!2.60e-13!57;UBERON:0003075!2.75e-13!86;UBERON:0007284!2.75e-13!86;UBERON:0002616!5.93e-13!59;UBERON:0000955!8.54e-13!69;UBERON:0006238!8.54e-13!69;UBERON:0000033!8.73e-13!123;UBERON:0000153!4.04e-12!129;UBERON:0007811!4.04e-12!129;UBERON:0000119!5.77e-11!312;UBERON:0000468!8.61e-11!659;UBERON:0000483!9.33e-11!309;UBERON:0000477!1.16e-10!286;UBERON:0003080!2.45e-09!42;UBERON:0002780!3.97e-09!41;UBERON:0001890!3.97e-09!41;UBERON:0006240!3.97e-09!41;UBERON:0000467!1.02e-08!625;UBERON:0000480!1.62e-08!626;UBERON:0003056!2.12e-08!61;UBERON:0000922!3.00e-08!612;UBERON:0004111!3.04e-08!241;UBERON:0002020!6.24e-08!34;UBERON:0003528!6.24e-08!34;UBERON:0002050!7.24e-08!605;UBERON:0005423!7.24e-08!605;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0002791!1.58e-07!33;UBERON:0000025!1.71e-07!194;UBERON:0001893!2.28e-07!34;UBERON:0000062!3.71e-07!511;UBERON:0000914!5.95e-07!83;UBERON:0002329!5.95e-07!83;UBERON:0003077!5.95e-07!83;UBERON:0003059!5.95e-07!83;UBERON:0007282!5.95e-07!83;UBERON:0009618!5.95e-07!83;UBERON:0007285!5.95e-07!83;UBERON:0001869!8.60e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.76e-07;34!UBERON:0002020;2.76e-07;34!UBERON:0002780;4.73e-07;41!UBERON:0001890;4.73e-07;41!UBERON:0000073;5.91e-07;53!UBERON:0002616;5.91e-07;53!UBERON:0002791;6.91e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.21e-15,132;UBERON:0001016,5.15e-14,89;UBERON:0001017,5.89e-14,81;UBERON:0007023,6.17e-13,114;UBERON:0001049,2.30e-12,56;UBERON:0005068,2.30e-12,56;UBERON:0006241,2.30e-12,56;UBERON:0007135,2.30e-12,56;UBERON:0004121,3.05e-12,171;UBERON:0000924,3.05e-12,171;UBERON:0006601,3.05e-12,171;UBERON:0000955,8.51e-12,68;UBERON:0006238,8.51e-12,68;UBERON:0002346,1.55e-11,86;UBERON:0003075,1.73e-11,82;UBERON:0007284,1.73e-11,82;UBERON:0000073,3.53e-11,53;UBERON:0002616,3.53e-11,53;UBERON:0002780,1.37e-08,41;UBERON:0001890,1.37e-08,41;UBERON:0003080,1.37e-08,41;UBERON:0006240,1.37e-08,41;UBERON:0003528,6.47e-08,34;UBERON:0002020,6.47e-08,34;UBERON:0011216,6.52e-08,223;UBERON:0010371,1.51e-07,104;UBERON:0002791,2.94e-07,32;UBERON:0001893,5.59e-07,34 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.9733616573436,1.0007329835313,1.78784437770915,5.23403114460221,0,1.26343974685366,0.783556884599516,0.737201809504527,0,0.655324116390517,1.31883489114227,1.48519623552056,2.65117900582333,0,1.20538905604795,2.19093027116212,2.43966399395253,0.738726348460727,2.44800829493104,0.626909442956176,2.0036519099174,3.14811177667634,2.63639543149086,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,2.17366355134002,3.61439152384566,2.00535164254356,3.76600949298142,0,1.94653948121054,1.13441780596881,0.886917589850256,0.790513071238134,1.63723844372141,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0,0,0.735326160691737,0,0.714397826272638,0.44905874525234,0.900891843866578,3.06633274931766,0,0.916008719652036,0,0,0,2.48485975847659,1.39293562831038,2.51577443545116,3.44203944898576,1.77334191099179,3.36406560085384,1.06748995729705,1.72667283892012,4.97937656639626,1.0776853765575,1.9615428373615,2.72443369760877,2.30470369792,1.17160715916898,0.624320153660641,1.1409436430889,0.896692083310806,1.76151747965647,2.42809416552197,1.40450806702248,2.24569588380383,3.19369225010597,3.92637968467909,4.75201142912821,4.94533858557114,5.46096817162816,0,2.18836948140286,1.7516592782075,2.49357703935765,3.5118209670467,1.83892677479412,4.6573798261045,1.02088964844019,0.717558542755448,3.20336083227851,2.33125091275518,3.00091096084402,1.8549455262919,2.57640540045629,2.60563598864226,2.36286865137773,0.876933046450788,2.52433774244115,2.20919756741518,5.81925804547723,2.84007674013291,1.61203357164224,0.847802961552438,0,0.272746120590835,0.860413786167011,0.121973706129595,0.132529768321485,0.464775771478074,1.86589899027667,0.252320850875628,0,1.56449532329816,2.57296375277154,0,1.39310378409594,0.721879481669586,0.828147600278907,1.01150814046861,0.723033089650446,0.55146986366197,0.653638332277218,0.71181185733329,0.808987848960987,0.196221465125346,0.38474715694639,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0.983907508344908,0.857839051492628,0.329250856225877,0,0.603173834469785,1.85176890317059,0.977424915930974,2.07986957055916,0,1.85488647960123,1.17408694235822,0.433099343283221,0.462985512576611,0,0,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.141775097242386,0.447792613514241,0,1.53353071666084,0,0,0.207328115540772,0.144119953416961,0.25248486685276,1.58744735730423,1.90994212779139,0,6.84289784090821,0.925447434329912,0,5.14487578735041,1.56983518083505,1.30788020649984,1.24675085895615,1.80980402060889,3.57656445851882,3.381211010224,1.32969058292435,4.16029747645464,1.54324424557285,2.83698264046557,1.3321108950805,2.85955987316295,3.25572963234866,0,1.62868092146868,2.13235169245527,2.37585561880029,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,0.958499421966331,2.29723871668228,0,1.15825045334063,2.67119219315498,2.68591444859843,0,0,0,0,1.27047312111232,5.20559415430487,3.09315525111078,2.34522771468088,2.55175500661265,0,0,0,5.15304265220388,1.00034104211935,2.44138521329762,1.66376689224646,1.60586089917446,0.788512075169673,2.34282829985426,1.50473049863859,6.82222512167955,5.17365356462525,2.65690239414175,2.39679919104214,2.5196248195744,1.95801157462741,2.05886054286514,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,1.98486246255021,0.460385919864187,1.12264037773229,3.07533958213682,1.02341449813341,1.44768529029247,2.96836132889982,3.39261326365842,3.72879623157567,2.13530605635904,4.15403543346897,1.51073491997947,1.45031339509947,0.200506470303285,0.644566922551274,1.03333003348146,2.54927635209404,2.22911505431021,0.451199612907412,0.693138033939733,0,2.92278449306521,0.422206515571503,1.13733384070897,1.53084334748864,0.863663664408557,0,0.541892875087706,1.00337954770971,0,0,0.447749509444357,0.219259876645935,0,1.02580050046556,0.984043937099117,1.95227036798582,1.44257416306811,1.73981983154852,2.22775649785588,0,0,0,2.70678011217942,2.31072925671967,1.22802939780904,1.37836572484531,2.36324538710202,2.17525040871343,1.44885266607372,1.33548053470106,0.165284915360978,0.192190067365106,0.510450849978337,1.2138933702666,0.929691098594572,3.1481234683064,0.6970372701606,0.924100740528266,0,2.60979897622522,1.66791797193528,1.28812398067792,1.116475108079,2.53103539774981,1.14378116354295,0.767693373934002,3.85145089230528,2.22742273548156,1.56989728039846,3.05783177891635,3.84351841630477,1.53156123049392,0.404364963146632,0,0.421258456238981,1.46290121726877,1.94970791705028,2.11300293513511,1.36499911407986,0.989838023675989,2.26016233240486,2.2054613741845,0,2.19225442626881,1.73632660280006,1.31178950409327,0.811641507850816,0.619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| |||
|short_description=p1@PYGO1 | |||
}} |
Latest revision as of 04:34, 18 September 2015
Short description: | p1@PYGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PYGO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000401688_5end |
EntrezGene: | PYGO1 |
HGNC: | 30256 |
UniProt: | A7Y2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.68e-13 | 76 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.21e-15 | 132 |
nervous system | 5.15e-14 | 89 |
central nervous system | 5.89e-14 | 81 |
adult organism | 6.17e-13 | 114 |
neural tube | 2.30e-12 | 56 |
neural rod | 2.30e-12 | 56 |
future spinal cord | 2.30e-12 | 56 |
neural keel | 2.30e-12 | 56 |
ectoderm-derived structure | 3.05e-12 | 171 |
ectoderm | 3.05e-12 | 171 |
presumptive ectoderm | 3.05e-12 | 171 |
brain | 8.51e-12 | 68 |
future brain | 8.51e-12 | 68 |
neurectoderm | 1.55e-11 | 86 |
neural plate | 1.73e-11 | 82 |
presumptive neural plate | 1.73e-11 | 82 |
regional part of nervous system | 3.53e-11 | 53 |
regional part of brain | 3.53e-11 | 53 |
regional part of forebrain | 1.37e-08 | 41 |
forebrain | 1.37e-08 | 41 |
anterior neural tube | 1.37e-08 | 41 |
future forebrain | 1.37e-08 | 41 |
brain grey matter | 6.47e-08 | 34 |
gray matter | 6.47e-08 | 34 |
organ system subdivision | 6.52e-08 | 223 |
ecto-epithelium | 1.51e-07 | 104 |
regional part of telencephalon | 2.94e-07 | 32 |
telencephalon | 5.59e-07 | 34 |