FFCP PHASE1:Hg19::chr9:91793624..91793649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53358 | |EntrezGene=53358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18181 | |HGNC=18181 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7I8,Q92529 | |UniProt=Q5T7I8,Q92529 | ||
|association_with_transcript=32bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | |association_with_transcript=32bp_to_ENST00000375830,ENST00000375835,NM_016848,uc004aqg.2_5end | ||
|cluster_id=chr9:91793624..91793649,- | |||
|description=CAGE_peak_2_at_SHC3_5end | |description=CAGE_peak_2_at_SHC3_5end | ||
|id=chr9:91793624..91793649,- | |id=chr9:91793624..91793649,- | ||
|ontology_enrichment_celltype=CL:0000055!9.35e-27!180;CL:0000393!4.73e-22!60;CL:0000211!4.73e-22!60;CL:0000192!9.07e-21!42;CL:0000514!9.07e-21!42;CL:0000187!1.60e-19!54;CL:0000680!5.00e-19!57;CL:0000056!5.00e-19!57;CL:0000355!5.00e-19!57;CL:0000183!6.24e-19!59;CL:0000359!1.55e-17!32;CL:0000222!3.40e-12!119;CL:0000057!9.97e-10!75;CL:0002494!8.12e-08!16;CL:0002539!1.52e-07!10;CL:0002321!3.48e-07!248;CL:0000220!3.82e-07!246 | |ontology_enrichment_celltype=CL:0000055!9.35e-27!180;CL:0000393!4.73e-22!60;CL:0000211!4.73e-22!60;CL:0000192!9.07e-21!42;CL:0000514!9.07e-21!42;CL:0000187!1.60e-19!54;CL:0000680!5.00e-19!57;CL:0000056!5.00e-19!57;CL:0000355!5.00e-19!57;CL:0000183!6.24e-19!59;CL:0000359!1.55e-17!32;CL:0000222!3.40e-12!119;CL:0000057!9.97e-10!75;CL:0002494!8.12e-08!16;CL:0002539!1.52e-07!10;CL:0002321!3.48e-07!248;CL:0000220!3.82e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.97e-20;32!CL:0000192;7.02e-18;43!CL:0000393;4.63e-11;61!CL:0000211;4.63e-11;61!CL:0000187;5.96e-11;55!CL:0002539;9.04e-09;10!CL:0002494;1.18e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.57e-25,43;CL:0000514,5.57e-25,43;CL:0000393,7.27e-24,61;CL:0000211,7.27e-24,61;CL:0000359,4.90e-21,32;CL:0000187,7.32e-21,55;CL:0000680,7.82e-19,58;CL:0000056,7.82e-19,58;CL:0000355,7.82e-19,58;CL:0000222,3.30e-12,121;CL:0002539,8.90e-09,10;CL:0002494,8.96e-09,16;CL:0000057,8.01e-08,76;CL:0002321,8.48e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;7.02e-18;43!CL:0000355;1.82e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!2.86e-07!14 | |ontology_enrichment_disease=DOID:2394!2.86e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.22e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.17e-29!194;UBERON:0004111!5.13e-27!241;UBERON:0000119!7.49e-27!312;UBERON:0000483!2.60e-26!309;UBERON:0000475!2.09e-25!365;UBERON:0000477!2.47e-24!286;UBERON:0001637!3.50e-21!42;UBERON:0003509!3.50e-21!42;UBERON:0004572!3.50e-21!42;UBERON:0000073!3.88e-19!94;UBERON:0001016!3.88e-19!94;UBERON:0000481!8.93e-19!347;UBERON:0005743!2.02e-18!86;UBERON:0003914!3.59e-18!118;UBERON:0001017!7.95e-18!82;UBERON:0004573!1.94e-16!33;UBERON:0004571!1.94e-16!33;UBERON:0001134!3.10e-16!61;UBERON:0002036!3.10e-16!61;UBERON:0003082!3.10e-16!61;UBERON:0002385!4.29e-16!63;UBERON:0001015!4.29e-16!63;UBERON:0000383!4.29e-16!63;UBERON:0000468!6.35e-16!659;UBERON:0001981!8.32e-16!60;UBERON:0007500!8.32e-16!60;UBERON:0004537!8.32e-16!60;UBERON:0006965!8.32e-16!60;UBERON:0004872!1.22e-15!84;UBERON:0001893!2.86e-15!34;UBERON:0001869!2.89e-15!32;UBERON:0004290!2.99e-15!70;UBERON:0002020!3.56e-15!34;UBERON:0003528!3.56e-15!34;UBERON:0000914!7.34e-15!83;UBERON:0002329!7.34e-15!83;UBERON:0003077!7.34e-15!83;UBERON:0003059!7.34e-15!83;UBERON:0007282!7.34e-15!83;UBERON:0009618!7.34e-15!83;UBERON:0007285!7.34e-15!83;UBERON:0002791!1.04e-14!33;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0002616!2.12e-14!59;UBERON:0000467!2.38e-14!625;UBERON:0000033!2.72e-14!123;UBERON:0000956!3.66e-14!25;UBERON:0000203!3.66e-14!25;UBERON:0000480!3.69e-14!626;UBERON:0002049!4.37e-14!79;UBERON:0007798!4.37e-14!79;UBERON:0005256!6.06e-14!143;UBERON:0000922!7.08e-14!612;UBERON:0000486!8.17e-14!82;UBERON:0000923!1.85e-13!604;UBERON:0005291!1.85e-13!604;UBERON:0006598!1.85e-13!604;UBERON:0002532!1.85e-13!604;UBERON:0003075!1.94e-13!86;UBERON:0007284!1.94e-13!86;UBERON:0000955!2.80e-13!69;UBERON:0006238!2.80e-13!69;UBERON:0002050!2.83e-13!605;UBERON:0005423!2.83e-13!605;UBERON:0003080!4.89e-13!42;UBERON:0003056!5.74e-13!61;UBERON:0002780!6.89e-13!41;UBERON:0001890!6.89e-13!41;UBERON:0006240!6.89e-13!41;UBERON:0000153!1.29e-12!129;UBERON:0007811!1.29e-12!129;UBERON:0002619!1.78e-12!22;UBERON:0004121!2.67e-12!169;UBERON:0000055!4.64e-12!69;UBERON:0002346!9.12e-12!90;UBERON:0001950!9.65e-12!20;UBERON:0004535!2.48e-11!110;UBERON:0000924!3.19e-11!173;UBERON:0006601!3.19e-11!173;UBERON:0001009!4.68e-11!113;UBERON:0002100!1.77e-10!216;UBERON:0000947!5.34e-10!21;UBERON:0010191!5.34e-10!21;UBERON:0000490!5.40e-10!138;UBERON:0001135!4.72e-08!15;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0000064!2.32e-07!219 | |ontology_enrichment_uberon=UBERON:0000025!1.17e-29!194;UBERON:0004111!5.13e-27!241;UBERON:0000119!7.49e-27!312;UBERON:0000483!2.60e-26!309;UBERON:0000475!2.09e-25!365;UBERON:0000477!2.47e-24!286;UBERON:0001637!3.50e-21!42;UBERON:0003509!3.50e-21!42;UBERON:0004572!3.50e-21!42;UBERON:0000073!3.88e-19!94;UBERON:0001016!3.88e-19!94;UBERON:0000481!8.93e-19!347;UBERON:0005743!2.02e-18!86;UBERON:0003914!3.59e-18!118;UBERON:0001017!7.95e-18!82;UBERON:0004573!1.94e-16!33;UBERON:0004571!1.94e-16!33;UBERON:0001134!3.10e-16!61;UBERON:0002036!3.10e-16!61;UBERON:0003082!3.10e-16!61;UBERON:0002385!4.29e-16!63;UBERON:0001015!4.29e-16!63;UBERON:0000383!4.29e-16!63;UBERON:0000468!6.35e-16!659;UBERON:0001981!8.32e-16!60;UBERON:0007500!8.32e-16!60;UBERON:0004537!8.32e-16!60;UBERON:0006965!8.32e-16!60;UBERON:0004872!1.22e-15!84;UBERON:0001893!2.86e-15!34;UBERON:0001869!2.89e-15!32;UBERON:0004290!2.99e-15!70;UBERON:0002020!3.56e-15!34;UBERON:0003528!3.56e-15!34;UBERON:0000914!7.34e-15!83;UBERON:0002329!7.34e-15!83;UBERON:0003077!7.34e-15!83;UBERON:0003059!7.34e-15!83;UBERON:0007282!7.34e-15!83;UBERON:0009618!7.34e-15!83;UBERON:0007285!7.34e-15!83;UBERON:0002791!1.04e-14!33;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0002616!2.12e-14!59;UBERON:0000467!2.38e-14!625;UBERON:0000033!2.72e-14!123;UBERON:0000956!3.66e-14!25;UBERON:0000203!3.66e-14!25;UBERON:0000480!3.69e-14!626;UBERON:0002049!4.37e-14!79;UBERON:0007798!4.37e-14!79;UBERON:0005256!6.06e-14!143;UBERON:0000922!7.08e-14!612;UBERON:0000486!8.17e-14!82;UBERON:0000923!1.85e-13!604;UBERON:0005291!1.85e-13!604;UBERON:0006598!1.85e-13!604;UBERON:0002532!1.85e-13!604;UBERON:0003075!1.94e-13!86;UBERON:0007284!1.94e-13!86;UBERON:0000955!2.80e-13!69;UBERON:0006238!2.80e-13!69;UBERON:0002050!2.83e-13!605;UBERON:0005423!2.83e-13!605;UBERON:0003080!4.89e-13!42;UBERON:0003056!5.74e-13!61;UBERON:0002780!6.89e-13!41;UBERON:0001890!6.89e-13!41;UBERON:0006240!6.89e-13!41;UBERON:0000153!1.29e-12!129;UBERON:0007811!1.29e-12!129;UBERON:0002619!1.78e-12!22;UBERON:0004121!2.67e-12!169;UBERON:0000055!4.64e-12!69;UBERON:0002346!9.12e-12!90;UBERON:0001950!9.65e-12!20;UBERON:0004535!2.48e-11!110;UBERON:0000924!3.19e-11!173;UBERON:0006601!3.19e-11!173;UBERON:0001009!4.68e-11!113;UBERON:0002100!1.77e-10!216;UBERON:0000947!5.34e-10!21;UBERON:0010191!5.34e-10!21;UBERON:0000490!5.40e-10!138;UBERON:0001135!4.72e-08!15;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0000064!2.32e-07!219 | ||
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| ||
|short_description=p2@SHC3 | |short_description=p2@SHC3 | ||
}} | }} |
Latest revision as of 04:28, 18 September 2015
Short description: | p2@SHC3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000375830, ENST00000375835, NM_016848, uc004aqg.2_5end |
EntrezGene: | SHC3 |
HGNC: | 18181 |
UniProt: | Q5T7I8Q92529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.57e-25 | 43 |
smooth muscle myoblast | 5.57e-25 | 43 |
electrically responsive cell | 7.27e-24 | 61 |
electrically active cell | 7.27e-24 | 61 |
vascular associated smooth muscle cell | 4.90e-21 | 32 |
muscle cell | 7.32e-21 | 55 |
muscle precursor cell | 7.82e-19 | 58 |
myoblast | 7.82e-19 | 58 |
multi-potent skeletal muscle stem cell | 7.82e-19 | 58 |
mesodermal cell | 3.30e-12 | 121 |
aortic smooth muscle cell | 8.90e-09 | 10 |
cardiocyte | 8.96e-09 | 16 |
fibroblast | 8.01e-08 | 76 |
embryonic cell | 8.48e-07 | 250 |
Ontology term | p-value | n |
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