FFCP PHASE1:Hg19::chr6:32821659..32821670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5698 | |EntrezGene=5698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9546 | |HGNC=9546 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-254bp_to_ENST00000464863_5end | |association_with_transcript=-254bp_to_ENST00000464863_5end | ||
|cluster_id=chr6:32821659..32821670,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_PSMB9_5end | |description=CAGE_peak_4_at_PSMB9_5end | ||
|id=chr6:32821659..32821670,+ | |id=chr6:32821659..32821670,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.31e-26!140;CL:0002057!2.20e-26!42;CL:0002087!5.05e-25!119;CL:0000860!7.29e-24!45;CL:0002031!5.76e-23!124;CL:0000988!2.09e-20!182;CL:0000037!5.10e-20!172;CL:0000566!5.10e-20!172;CL:0002032!6.85e-20!165;CL:0000837!6.85e-20!165;CL:0000766!1.01e-18!76;CL:0002009!4.77e-17!65;CL:0002194!9.37e-17!63;CL:0000576!9.37e-17!63;CL:0000040!9.37e-17!63;CL:0000559!9.37e-17!63;CL:0000557!1.28e-15!71;CL:0000839!6.16e-15!70;CL:0000763!3.75e-12!112;CL:0000049!3.75e-12!112;CL:0002393!1.20e-11!9;CL:0002397!1.20e-11!9;CL:0000838!3.64e-08!52;CL:0000542!6.87e-08!53;CL:0000051!6.87e-08!53 | |ontology_enrichment_celltype=CL:0000738!1.31e-26!140;CL:0002057!2.20e-26!42;CL:0002087!5.05e-25!119;CL:0000860!7.29e-24!45;CL:0002031!5.76e-23!124;CL:0000988!2.09e-20!182;CL:0000037!5.10e-20!172;CL:0000566!5.10e-20!172;CL:0002032!6.85e-20!165;CL:0000837!6.85e-20!165;CL:0000766!1.01e-18!76;CL:0002009!4.77e-17!65;CL:0002194!9.37e-17!63;CL:0000576!9.37e-17!63;CL:0000040!9.37e-17!63;CL:0000559!9.37e-17!63;CL:0000557!1.28e-15!71;CL:0000839!6.16e-15!70;CL:0000763!3.75e-12!112;CL:0000049!3.75e-12!112;CL:0002393!1.20e-11!9;CL:0002397!1.20e-11!9;CL:0000838!3.64e-08!52;CL:0000542!6.87e-08!53;CL:0000051!6.87e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-28;33!CL:0002057;1.76e-28;33!CL:0000473;9.62e-20;39!CL:0000234;9.62e-20;39!CL:0000576;1.29e-18;48!CL:0000766;8.36e-09;69!CL:0000763;3.00e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.73e-29,42;CL:0002057,4.73e-29,42;CL:0000473,3.10e-25,48;CL:0000234,3.10e-25,48;CL:0000766,1.37e-22,72;CL:0002194,6.94e-20,59;CL:0000576,6.94e-20,59;CL:0000040,6.94e-20,59;CL:0000559,6.94e-20,59;CL:0002009,3.41e-19,61;CL:0000839,1.20e-17,66;CL:0000738,2.12e-17,136;CL:0000557,2.31e-17,67;CL:0002087,8.81e-16,115;CL:0002031,4.82e-15,120;CL:0000763,1.68e-14,108;CL:0000049,1.68e-14,108;CL:0002032,2.33e-14,161;CL:0000837,2.33e-14,161;CL:0000037,1.14e-13,168;CL:0000988,7.37e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.36e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.41e-21!102;UBERON:0003061!6.41e-21!102;UBERON:0002193!2.23e-20!112;UBERON:0002371!1.29e-12!80;UBERON:0002405!2.94e-12!115;UBERON:0001474!5.39e-11!86;UBERON:0004765!1.81e-08!101;UBERON:0001434!1.81e-08!101;UBERON:0000178!2.85e-08!15;UBERON:0000179!2.85e-08!15;UBERON:0000463!2.85e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.40e-16,98;UBERON:0003061,3.40e-16,98;UBERON:0002371,3.76e-15,76;UBERON:0002193,1.56e-14,108;UBERON:0001474,6.09e-14,82;UBERON:0004765,1.41e-12,90;UBERON:0002405,4.01e-12,93;UBERON:0001434,3.59e-11,100;UBERON:0003081,4.53e-08,203 | |||
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| ||
|short_description=p4@PSMB9 | |short_description=p4@PSMB9 | ||
}} | }} |
Latest revision as of 04:18, 18 September 2015
Short description: | p4@PSMB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PSMB9_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -254bp_to_ENST00000464863_5end |
EntrezGene: | PSMB9 |
HGNC: | 9546 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.73e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.73e-29 | 42 |
defensive cell | 3.10e-25 | 48 |
phagocyte | 3.10e-25 | 48 |
myeloid leukocyte | 1.37e-22 | 72 |
monopoietic cell | 6.94e-20 | 59 |
monocyte | 6.94e-20 | 59 |
monoblast | 6.94e-20 | 59 |
promonocyte | 6.94e-20 | 59 |
macrophage dendritic cell progenitor | 3.41e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.20e-17 | 66 |
leukocyte | 2.12e-17 | 136 |
granulocyte monocyte progenitor cell | 2.31e-17 | 67 |
nongranular leukocyte | 8.81e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.82e-15 | 120 |
myeloid cell | 1.68e-14 | 108 |
common myeloid progenitor | 1.68e-14 | 108 |
hematopoietic oligopotent progenitor cell | 2.33e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-14 | 161 |
hematopoietic stem cell | 1.14e-13 | 168 |
hematopoietic cell | 7.37e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.40e-16 | 98 |
blood island | 3.40e-16 | 98 |
bone marrow | 3.76e-15 | 76 |
hemolymphoid system | 1.56e-14 | 108 |
bone element | 6.09e-14 | 82 |
skeletal element | 1.41e-12 | 90 |
immune system | 4.01e-12 | 93 |
skeletal system | 3.59e-11 | 100 |
lateral plate mesoderm | 4.53e-08 | 203 |