FFCP PHASE1:Hg19::chr1:161014760..161014788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7391 | |EntrezGene=7391 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12593 | |HGNC=12593 | ||
|TSSclassifier=strong | |||
|UniProt=P22415 | |UniProt=P22415 | ||
|association_with_transcript=-29bp_to_ENST00000368020_5end | |association_with_transcript=-29bp_to_ENST00000368020_5end | ||
|cluster_id=chr1:161014760..161014788,- | |||
|description=CAGE_peak_4_at_USF1_5end | |description=CAGE_peak_4_at_USF1_5end | ||
|id=chr1:161014760..161014788,- | |id=chr1:161014760..161014788,- | ||
|ontology_enrichment_celltype=CL:0000037!3.41e-42!172;CL:0000566!3.41e-42!172;CL:0000988!1.78e-40!182;CL:0002032!2.91e-38!165;CL:0000837!2.91e-38!165;CL:0000738!2.18e-36!140;CL:0002031!5.46e-35!124;CL:0002087!1.45e-34!119;CL:0000763!4.89e-27!112;CL:0000049!4.89e-27!112;CL:0002057!6.05e-27!42;CL:0000557!7.27e-25!71;CL:0000839!2.34e-24!70;CL:0000766!3.59e-24!76;CL:0002009!4.18e-24!65;CL:0000860!1.43e-23!45;CL:0002194!3.05e-23!63;CL:0000576!3.05e-23!63;CL:0000040!3.05e-23!63;CL:0000559!3.05e-23!63;CL:0002320!1.26e-10!365;CL:0000542!4.12e-10!53;CL:0000051!4.12e-10!53;CL:0000838!4.25e-10!52;CL:0000134!6.04e-10!358;CL:0002393!1.86e-08!9;CL:0002397!1.86e-08!9;CL:0000219!2.96e-08!390;CL:0000945!1.07e-07!24;CL:0000826!1.07e-07!24;CL:0000048!6.94e-07!430;CL:0000034!8.60e-07!444 | |ontology_enrichment_celltype=CL:0000037!3.41e-42!172;CL:0000566!3.41e-42!172;CL:0000988!1.78e-40!182;CL:0002032!2.91e-38!165;CL:0000837!2.91e-38!165;CL:0000738!2.18e-36!140;CL:0002031!5.46e-35!124;CL:0002087!1.45e-34!119;CL:0000763!4.89e-27!112;CL:0000049!4.89e-27!112;CL:0002057!6.05e-27!42;CL:0000557!7.27e-25!71;CL:0000839!2.34e-24!70;CL:0000766!3.59e-24!76;CL:0002009!4.18e-24!65;CL:0000860!1.43e-23!45;CL:0002194!3.05e-23!63;CL:0000576!3.05e-23!63;CL:0000040!3.05e-23!63;CL:0000559!3.05e-23!63;CL:0002320!1.26e-10!365;CL:0000542!4.12e-10!53;CL:0000051!4.12e-10!53;CL:0000838!4.25e-10!52;CL:0000134!6.04e-10!358;CL:0002393!1.86e-08!9;CL:0002397!1.86e-08!9;CL:0000219!2.96e-08!390;CL:0000945!1.07e-07!24;CL:0000826!1.07e-07!24;CL:0000048!6.94e-07!430;CL:0000034!8.60e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.57e-36;48!CL:0000860;1.80e-36;33!CL:0002057;1.80e-36;33!CL:0000473;3.64e-26;39!CL:0000234;3.64e-26;39!CL:0000766;7.85e-25;69!CL:0002087;8.27e-15;104!CL:0000738;1.46e-13;136!CL:0000763;1.84e-13;100!CL:0000236;2.15e-12;13!CL:0002393;3.39e-12;6!CL:0002397;3.39e-12;6!CL:0000988;5.03e-08;177!CL:0000875;4.33e-07;3!CL:0002396;4.33e-07;3!CL:0000945;8.84e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.79e-57,42;CL:0002057,4.79e-57,42;CL:0000037,1.01e-52,168;CL:0000473,7.21e-51,48;CL:0000234,7.21e-51,48;CL:0000766,1.29e-50,72;CL:0000988,3.59e-50,177;CL:0002009,3.00e-49,61;CL:0002194,3.37e-49,59;CL:0000576,3.37e-49,59;CL:0000040,3.37e-49,59;CL:0000559,3.37e-49,59;CL:0000839,1.02e-48,66;CL:0000738,1.90e-48,136;CL:0000557,4.94e-48,67;CL:0002032,9.00e-48,161;CL:0000837,9.00e-48,161;CL:0000763,1.02e-47,108;CL:0000049,1.02e-47,108;CL:0002087,3.78e-46,115;CL:0002031,2.27e-44,120;CL:0000134,4.56e-18,354;CL:0002393,1.51e-17,9;CL:0002397,1.51e-17,9;CL:0002320,2.96e-17,361;CL:0000219,1.44e-15,386;CL:0000034,5.52e-14,441;CL:0000048,3.12e-13,427;CL:0000723,1.02e-12,433;CL:0000236,1.32e-11,14;CL:0000875,4.83e-07,3;CL:0002396,4.83e-07,3;CL:0000945,6.94e-07,24;CL:0000826,6.94e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-39;42!CL:0000049;1.84e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.21e-31!112;UBERON:0002390!1.26e-30!102;UBERON:0003061!1.26e-30!102;UBERON:0002371!1.47e-21!80;UBERON:0001474!9.55e-19!86;UBERON:0002405!1.68e-18!115;UBERON:0004765!1.77e-14!101;UBERON:0001434!1.77e-14!101;UBERON:0003081!9.13e-11!216;UBERON:0002384!3.22e-10!375;UBERON:0002204!6.04e-08!167;UBERON:0000178!3.25e-07!15;UBERON:0000179!3.25e-07!15;UBERON:0000463!3.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-15;15!UBERON:0000179;1.92e-15;15!UBERON:0000463;1.92e-15;15!UBERON:0002390;1.18e-09;32!UBERON:0002193;2.41e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.99e-56,108;UBERON:0002390,5.83e-56,98;UBERON:0003061,5.83e-56,98;UBERON:0002371,1.26e-42,76;UBERON:0002405,6.22e-42,93;UBERON:0001474,2.13e-38,82;UBERON:0004765,1.20e-33,90;UBERON:0001434,4.21e-30,100;UBERON:0003081,2.23e-23,203;UBERON:0002384,3.77e-16,371;UBERON:0000178,1.15e-15,15;UBERON:0000179,1.15e-15,15;UBERON:0000463,1.15e-15,15;UBERON:0002204,2.10e-15,167;UBERON:0000926,1.59e-09,315;UBERON:0004120,1.59e-09,315;UBERON:0006603,1.59e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.492484232307152,1.02000345622126,0.626909442956176,0,0.136874425072884,0.125542639594803,0.993374274723366,1.14940825229924,0.550975469195755,3.54027849164014,1.53531759238885,1.85779347979291,0,0,0,0.542270404062111,0.426507697462265,2.05520307534393,4.9859586767869,5.41470008169383,2.38711957787437,1.34349284543955,0.32389366601898,0.77272670290256,4.21654892460738,2.64513160582167,2.66842467306598,2.78914844286822,2.05583944010913,1.23882548358041,1.43846196161075,2.0492856522328,3.31075121844019,2.75796544589295,1.93645405075148,0,3.57660445130949,1.36453075028923,3.14612878223118,3.06083892370903,1.28371610830437,1.91801137739712,2.96866170168044,1.79517291859469,2.98357325372886,1.16083695451434,1.13477044938228,3.11411124497787,1.7587406567972,3.65038042894141,1.52032191293582,0.605399502633369,1.47311054395026,3.79754864929061,4.64761629886272,5.74031609905618,3.56419697364239,3.48218756554135,3.90459921387916,0.64290234678832,6.27028036230747,6.16641699317179,3.47061892152804,1.75996244461323,4.91524750135918,0,4.69403244823158,3.60356388332411,2.29900975981793,3.96626923670917,3.81621501814146,1.1384259382189,0.587237189370939,1.91136614062614,2.64342657158052,2.24203425192614,3.68737718685108,1.180258620683,0.786021525498329,0,0.334372990781356,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0,0.276350017785848,0.579606171470105,0,0.267540828089713,0,0.453237370790265,0.766440987203842,0,0.253019692019503,0.95569624297229,1.30216690771284,0.950452044448374,0.752875595388864,1.15187950038977,1.24930726552346,0.236777252044017,0,0.201606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.458426764241994,0,0,0.324547393654683,0.522389211897802,0.26591592103773,2.62339686735876,0.571994910780128,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0.805658634218294,0,0,0,0,0.267899184852239,0,0,1.53316637465883,0,0,3.9534125230819,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.80823028409406,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,1.58803092537181,1.38895653772983,0.761016608938393,0,0,1.47730203652438,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,1.40877494421162,0.207328115540772,0.720599767084807,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.560425719967636,0.985153801009636,0.646882724578552,0.385029108839245,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0.36807447515742,0.500170521059677,0.542530047399471,0.207970861530807,0,0,0.468565659970853,0,0,0,0,0,0.260650843404249,0.391602314925481,0.343143423810856,2.27444828735176,2.5885704098234,2.13455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,1.26295892981067,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0,0,0,1.00337954770971,0,0,0.223874754722178,1.09629938322967,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0,0.445160178233687,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,1.94970791705028,0,0.818999468447914,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,3.55213326462519,4.58782324285425,3.98753031021914,2.85878130549347,1.64544909234478,3.8908398671563,1.62009431171434,3.17250070517708,0,0,0,0.185803175125719,2.8853842595289,0.497992903438899,0.159426272728822,0.997896857164083,1.34053759092657,0.635020748171649,0.649243880549111,2.24637742490767,2.9670508274315,0.313359791546046,2.50634477090067,2.37008488922245,0.963528450622197,2.42159648629257,0.425846237690326,1.03051603426729,2.15068535015921,1.3420566473545,1.16794399198336,0.586164286206121,0,0,0,0,0,0,0.586032717087576,0,0.445773537109913,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0.276283915531148,0,0,0.123084805461069,0,0.269605053441981,0.358042349351218,1.534717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| ||
|short_description=p4@USF1 | |short_description=p4@USF1 | ||
}} | }} |
Latest revision as of 04:14, 18 September 2015
Short description: | p4@USF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000368020_5end |
EntrezGene: | USF1 |
HGNC: | 12593 |
UniProt: | P22415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.99e-56 | 108 |
hematopoietic system | 5.83e-56 | 98 |
blood island | 5.83e-56 | 98 |
bone marrow | 1.26e-42 | 76 |
immune system | 6.22e-42 | 93 |
bone element | 2.13e-38 | 82 |
skeletal element | 1.20e-33 | 90 |
skeletal system | 4.21e-30 | 100 |
lateral plate mesoderm | 2.23e-23 | 203 |
connective tissue | 3.77e-16 | 371 |
blood | 1.15e-15 | 15 |
haemolymphatic fluid | 1.15e-15 | 15 |
organism substance | 1.15e-15 | 15 |
musculoskeletal system | 2.10e-15 | 167 |
mesoderm | 1.59e-09 | 315 |
mesoderm-derived structure | 1.59e-09 | 315 |
presumptive mesoderm | 1.59e-09 | 315 |