FFCP PHASE1:Hg19::chr12:320356..320396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6539 | |EntrezGene=6539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11045 | |HGNC=11045 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2T6 | |UniProt=F5H2T6 | ||
|association_with_transcript=0bp_to_ENST00000537793_5end | |association_with_transcript=0bp_to_ENST00000537793_5end | ||
|cluster_id=chr12:320356..320396,- | |||
|description=CAGE_peak_22_at_SLC6A12_5end | |description=CAGE_peak_22_at_SLC6A12_5end | ||
|id=chr12:320356..320396,- | |id=chr12:320356..320396,- | ||
|ontology_enrichment_celltype=CL:0001014!4.10e-19!2;CL:0001016!4.10e-19!2;CL:0000453!3.48e-08!5;CL:0000840!5.92e-07!5;CL:0001029!5.92e-07!5 | |ontology_enrichment_celltype=CL:0001014!4.10e-19!2;CL:0001016!4.10e-19!2;CL:0000453!3.48e-08!5;CL:0000840!5.92e-07!5;CL:0001029!5.92e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.27e-34;2!CL:0001016;4.27e-34;2!CL:0000453;1.50e-14;5!CL:0000840;2.31e-12;5!CL:0000990;1.08e-08;8!CL:0000451;2.40e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000453,1.60e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.50e-14;5!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.17e-20!32;UBERON:0002791!3.39e-19!33;UBERON:0002780!6.89e-19!41;UBERON:0001890!6.89e-19!41;UBERON:0006240!6.89e-19!41;UBERON:0002020!1.30e-18!34;UBERON:0003528!1.30e-18!34;UBERON:0001893!1.30e-18!34;UBERON:0003080!2.05e-18!42;UBERON:0001049!4.04e-16!57;UBERON:0005068!4.04e-16!57;UBERON:0006241!4.04e-16!57;UBERON:0007135!4.04e-16!57;UBERON:0002616!1.59e-15!59;UBERON:0007023!2.18e-14!115;UBERON:0002619!5.14e-13!22;UBERON:0000955!7.52e-13!69;UBERON:0006238!7.52e-13!69;UBERON:0003056!2.59e-12!61;UBERON:0009663!9.79e-12!7;UBERON:0000956!1.83e-11!25;UBERON:0000203!1.83e-11!25;UBERON:0001017!1.37e-10!82;UBERON:0003075!3.64e-10!86;UBERON:0007284!3.64e-10!86;UBERON:0001301!3.71e-10!1;UBERON:0001874!4.06e-10!1;UBERON:0001950!4.35e-10!20;UBERON:0005743!4.97e-10!86;UBERON:0002022!5.79e-10!1;UBERON:0002581!8.99e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0002346!1.22e-09!90;UBERON:0000369!1.66e-09!4;UBERON:0002435!1.66e-09!4;UBERON:0000204!1.66e-09!4;UBERON:0010082!1.66e-09!4;UBERON:0002308!3.04e-09!9;UBERON:0002420!3.04e-09!9;UBERON:0000125!3.04e-09!9;UBERON:0007245!3.04e-09!9;UBERON:0010009!3.04e-09!9;UBERON:0010011!3.04e-09!9;UBERON:0000454!3.04e-09!9;UBERON:0000073!6.16e-09!94;UBERON:0001016!6.16e-09!94;UBERON:0000349!9.23e-08!5;UBERON:0001872!1.25e-07!5 | |ontology_enrichment_uberon=UBERON:0001869!8.17e-20!32;UBERON:0002791!3.39e-19!33;UBERON:0002780!6.89e-19!41;UBERON:0001890!6.89e-19!41;UBERON:0006240!6.89e-19!41;UBERON:0002020!1.30e-18!34;UBERON:0003528!1.30e-18!34;UBERON:0001893!1.30e-18!34;UBERON:0003080!2.05e-18!42;UBERON:0001049!4.04e-16!57;UBERON:0005068!4.04e-16!57;UBERON:0006241!4.04e-16!57;UBERON:0007135!4.04e-16!57;UBERON:0002616!1.59e-15!59;UBERON:0007023!2.18e-14!115;UBERON:0002619!5.14e-13!22;UBERON:0000955!7.52e-13!69;UBERON:0006238!7.52e-13!69;UBERON:0003056!2.59e-12!61;UBERON:0009663!9.79e-12!7;UBERON:0000956!1.83e-11!25;UBERON:0000203!1.83e-11!25;UBERON:0001017!1.37e-10!82;UBERON:0003075!3.64e-10!86;UBERON:0007284!3.64e-10!86;UBERON:0001301!3.71e-10!1;UBERON:0001874!4.06e-10!1;UBERON:0001950!4.35e-10!20;UBERON:0005743!4.97e-10!86;UBERON:0002022!5.79e-10!1;UBERON:0002581!8.99e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0002346!1.22e-09!90;UBERON:0000369!1.66e-09!4;UBERON:0002435!1.66e-09!4;UBERON:0000204!1.66e-09!4;UBERON:0010082!1.66e-09!4;UBERON:0002308!3.04e-09!9;UBERON:0002420!3.04e-09!9;UBERON:0000125!3.04e-09!9;UBERON:0007245!3.04e-09!9;UBERON:0010009!3.04e-09!9;UBERON:0010011!3.04e-09!9;UBERON:0000454!3.04e-09!9;UBERON:0000073!6.16e-09!94;UBERON:0001016!6.16e-09!94;UBERON:0000349!9.23e-08!5;UBERON:0001872!1.25e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.50e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p22@SLC6A12 | |short_description=p22@SLC6A12 | ||
}} | }} |
Latest revision as of 04:12, 18 September 2015
Short description: | p22@SLC6A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SLC6A12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537793_5end |
EntrezGene: | SLC6A12 |
HGNC: | 11045 |
UniProt: | F5H2T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
Langerhans cell | 1.60e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |