FFCP PHASE1:Hg19::chr6:32812116..32812208,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32812116..32812208,-
|short_description=p2@PSMB8
|description=CAGE_peak_2_at_PSMB8_5end
|association_with_transcript=219bp_to_ENST00000484003_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5696 | |EntrezGene=5696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9545 | |HGNC=9545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=219bp_to_ENST00000484003_5end | |||
|cluster_id=chr6:32812116..32812208,- | |||
|description=CAGE_peak_2_at_PSMB8_5end | |||
|id=chr6:32812116..32812208,- | |||
|ontology_enrichment_celltype=CL:0000003!9.49e-20!722;CL:0000738!3.07e-19!140;CL:0002087!3.29e-18!119;CL:0000838!7.91e-16!52;CL:0000542!1.02e-15!53;CL:0000051!1.02e-15!53;CL:0002031!1.62e-13!124;CL:0000084!2.31e-13!25;CL:0000827!2.31e-13!25;CL:0000048!2.36e-13!430;CL:0000034!4.69e-13!444;CL:0000723!9.73e-13!436;CL:0002320!4.06e-11!365;CL:0000791!4.33e-11!18;CL:0000789!4.33e-11!18;CL:0002420!4.33e-11!18;CL:0002419!4.33e-11!18;CL:0000790!4.33e-11!18;CL:0000144!4.66e-11!625;CL:0000134!1.76e-10!358;CL:0000012!1.82e-10!682;CL:0002371!2.18e-10!591;CL:0000988!5.21e-10!182;CL:0000548!9.20e-10!679;CL:0000004!9.20e-10!679;CL:0000255!9.20e-10!679;CL:0000219!1.57e-09!390;CL:0000037!5.74e-09!172;CL:0000566!5.74e-09!172;CL:0000860!6.71e-09!45;CL:0002057!4.33e-08!42;CL:0000625!1.09e-07!11;CL:0002032!4.07e-07!165;CL:0000837!4.07e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.96e-13;25!CL:0000791;3.84e-11;18!CL:0000789;3.84e-11;18!CL:0002419;3.84e-11;18!CL:0000542;1.94e-09;53!CL:0000625;1.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.58e-18,136;CL:0002087,1.62e-17,115;CL:0000838,7.79e-16,52;CL:0000542,1.00e-15,53;CL:0000051,1.00e-15,53;CL:0000084,2.28e-13,25;CL:0000827,2.28e-13,25;CL:0000048,5.15e-13,427;CL:0002031,7.67e-13,120;CL:0000034,1.05e-12,441;CL:0000723,2.14e-12,433;CL:0000791,4.29e-11,18;CL:0000789,4.29e-11,18;CL:0002420,4.29e-11,18;CL:0002419,4.29e-11,18;CL:0000790,4.29e-11,18;CL:0002320,9.30e-11,361;CL:0000134,3.92e-10,354;CL:0000988,1.07e-09,177;CL:0000219,3.12e-09,386;CL:0000037,1.81e-08,168;CL:0000860,4.30e-08,42;CL:0002057,4.30e-08,42;CL:0000625,1.08e-07,11;CL:0000473,8.39e-07,48;CL:0000234,8.39e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;3.84e-11;18!CL:0000051;1.94e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.35e-10!375;UBERON:0000178!5.77e-08!15;UBERON:0000179!5.77e-08!15;UBERON:0000463!5.77e-08!15;UBERON:0002390!2.15e-07!102;UBERON:0003061!2.15e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.54e-08;15!UBERON:0000179;5.54e-08;15!UBERON:0000463;5.54e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.05e-10,371;UBERON:0000178,5.73e-08,15;UBERON:0000179,5.73e-08,15;UBERON:0000463,5.73e-08,15;UBERON:0002390,7.25e-07,98;UBERON:0003061,7.25e-07,98 | |||
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| ||
|short_description=p2@PSMB8 | |||
}} | }} |
Latest revision as of 04:11, 18 September 2015
Short description: | p2@PSMB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSMB8_5end |
Coexpression cluster: | NA |
Association with transcript: | 219bp_to_ENST00000484003_5end |
EntrezGene: | PSMB8 |
HGNC: | 9545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.58e-18 | 136 |
nongranular leukocyte | 1.62e-17 | 115 |
lymphoid lineage restricted progenitor cell | 7.79e-16 | 52 |
lymphocyte | 1.00e-15 | 53 |
common lymphoid progenitor | 1.00e-15 | 53 |
T cell | 2.28e-13 | 25 |
pro-T cell | 2.28e-13 | 25 |
multi fate stem cell | 5.15e-13 | 427 |
hematopoietic lineage restricted progenitor cell | 7.67e-13 | 120 |
stem cell | 1.05e-12 | 441 |
somatic stem cell | 2.14e-12 | 433 |
mature alpha-beta T cell | 4.29e-11 | 18 |
alpha-beta T cell | 4.29e-11 | 18 |
immature T cell | 4.29e-11 | 18 |
mature T cell | 4.29e-11 | 18 |
immature alpha-beta T cell | 4.29e-11 | 18 |
connective tissue cell | 9.30e-11 | 361 |
mesenchymal cell | 3.92e-10 | 354 |
hematopoietic cell | 1.07e-09 | 177 |
motile cell | 3.12e-09 | 386 |
hematopoietic stem cell | 1.81e-08 | 168 |
classical monocyte | 4.30e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.30e-08 | 42 |
CD8-positive, alpha-beta T cell | 1.08e-07 | 11 |
defensive cell | 8.39e-07 | 48 |
phagocyte | 8.39e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.05e-10 | 371 |
blood | 5.73e-08 | 15 |
haemolymphatic fluid | 5.73e-08 | 15 |
organism substance | 5.73e-08 | 15 |
hematopoietic system | 7.25e-07 | 98 |
blood island | 7.25e-07 | 98 |