FFCP PHASE1:Hg19::chr11:4726112..4726125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56547 | |EntrezGene=56547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14249 | |HGNC=14249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000477339_5end | |association_with_transcript=-31bp_to_ENST00000477339_5end | ||
|cluster_id=chr11:4726112..4726125,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_2_at_MMP26_5end | |description=CAGE_peak_2_at_MMP26_5end | ||
|id=chr11:4726112..4726125,+ | |id=chr11:4726112..4726125,+ | ||
|ontology_enrichment_celltype=CL:0002553!4.61e-26!1;CL:0000167!5.93e-26!1;CL:0000164!5.93e-26!1;CL:0000502!5.93e-26!1;CL:0000172!5.93e-26!1;CL:0000173!5.93e-26!1;CL:0002351!5.93e-26!1 | |ontology_enrichment_celltype=CL:0002553!4.61e-26!1;CL:0000167!5.93e-26!1;CL:0000164!5.93e-26!1;CL:0000502!5.93e-26!1;CL:0000172!5.93e-26!1;CL:0000173!5.93e-26!1;CL:0002351!5.93e-26!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!5.93e-26!1;DOID:0050619!7.62e-26!1;DOID:1357!7.62e-26!1;DOID:0050615!1.11e-14!16;DOID:3119!4.04e-08!14;DOID:1324!1.22e-07!15;DOID:5409!1.31e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.13e-20;14!DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14;DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!7.62e-26!1;UBERON:0001825!7.62e-26!1;UBERON:0002581!9.79e-26!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@MMP26 | |short_description=p2@MMP26 | ||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p2@MMP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP26_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -31bp_to_ENST00000477339_5end |
EntrezGene: | MMP26 |
HGNC: | 14249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.13e-20 | 14 |
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |