FFCP PHASE1:Hg19::chr15:55582029..55582053,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:55582029..55582053,- to FFCP PHASE1:Hg19::chr15:55582029..55582053,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5873 | |EntrezGene=5873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9766 | |HGNC=9766 | ||
|TSSclassifier=strong | |||
|UniProt=A2RU94,P51159 | |UniProt=A2RU94,P51159 | ||
|association_with_transcript=-16bp_to_NM_183235_5end | |||
|cluster_id=chr15:55582029..55582053,- | |||
|description=CAGE_peak_2_at_RAB27A_5end | |||
|id=chr15:55582029..55582053,- | |||
|ontology_enrichment_celltype=CL:0002032!4.37e-16!165;CL:0000837!4.37e-16!165;CL:0000037!2.59e-15!172;CL:0000566!2.59e-15!172;CL:0000763!1.59e-13!112;CL:0000049!1.59e-13!112;CL:0002087!4.94e-13!119;CL:0000988!8.01e-12!182;CL:0000766!1.42e-11!76;CL:0000738!1.63e-11!140;CL:0002031!2.46e-11!124;CL:0000860!1.18e-10!45;CL:0000134!1.37e-10!358;CL:0002194!1.47e-10!63;CL:0000576!1.47e-10!63;CL:0000040!1.47e-10!63;CL:0000559!1.47e-10!63;CL:0002320!1.88e-10!365;CL:0002009!3.45e-10!65;CL:0000723!4.52e-10!436;CL:0000048!5.79e-10!430;CL:0002057!9.63e-10!42;CL:0000003!1.28e-09!722;CL:0000839!3.68e-09!70;CL:0000034!4.91e-09!444;CL:0000557!1.93e-08!71;CL:0000063!3.81e-08!578;CL:0000625!1.44e-07!11;CL:0000219!2.13e-07!390;CL:0002371!3.31e-07!591;CL:0000084!9.42e-07!25;CL:0000827!9.42e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.24e-07;11!CL:0000860;3.10e-07;33!CL:0002057;3.10e-07;33!CL:0000084;6.69e-07;25!CL:0000576;6.96e-07;48!CL:0000473;7.77e-07;39!CL:0000234;7.77e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,2.27e-15,161;CL:0000837,2.27e-15,161;CL:0000037,6.83e-15,168;CL:0000763,5.54e-13,108;CL:0000049,5.54e-13,108;CL:0002087,1.13e-12,115;CL:0000988,9.22e-12,177;CL:0000766,2.79e-11,72;CL:0000738,3.99e-11,136;CL:0002031,7.20e-11,120;CL:0002194,2.01e-10,59;CL:0000576,2.01e-10,59;CL:0000040,2.01e-10,59;CL:0000559,2.01e-10,59;CL:0000134,2.85e-10,354;CL:0002320,2.93e-10,361;CL:0000473,4.43e-10,48;CL:0000234,4.43e-10,48;CL:0000860,4.65e-10,42;CL:0002057,4.65e-10,42;CL:0002009,4.91e-10,61;CL:0000723,1.04e-09,433;CL:0000048,1.27e-09,427;CL:0000839,1.05e-08,66;CL:0000034,1.24e-08,441;CL:0000557,3.33e-08,67;CL:0000625,8.42e-08,11;CL:0000219,3.44e-07,386;CL:0000084,5.50e-07,25;CL:0000827,5.50e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!7.54e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.58e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-10!102;UBERON:0003061!1.79e-10!102;UBERON:0002384!4.91e-10!375;UBERON:0002193!1.52e-08!112;UBERON:0002371!1.83e-08!80;UBERON:0004765!5.65e-08!101;UBERON:0001434!5.65e-08!101;UBERON:0001474!1.63e-07!86;UBERON:0002204!3.75e-07!167;UBERON:0002405!4.48e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.61e-10,98;UBERON:0003061,2.61e-10,98;UBERON:0002384,9.24e-10,371;UBERON:0002371,2.77e-08,76;UBERON:0004765,4.23e-08,90;UBERON:0002193,5.30e-08,108;UBERON:0001434,5.51e-08,100;UBERON:0002204,2.40e-07,167;UBERON:0001474,4.14e-07,82 | |||
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| ||
|short_description=p2@RAB27A | |||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p2@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB27A_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_NM_183235_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | A2RU94P51159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 2.27e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-15 | 161 |
hematopoietic stem cell | 6.83e-15 | 168 |
myeloid cell | 5.54e-13 | 108 |
common myeloid progenitor | 5.54e-13 | 108 |
nongranular leukocyte | 1.13e-12 | 115 |
hematopoietic cell | 9.22e-12 | 177 |
myeloid leukocyte | 2.79e-11 | 72 |
leukocyte | 3.99e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.20e-11 | 120 |
monopoietic cell | 2.01e-10 | 59 |
monocyte | 2.01e-10 | 59 |
monoblast | 2.01e-10 | 59 |
promonocyte | 2.01e-10 | 59 |
mesenchymal cell | 2.85e-10 | 354 |
connective tissue cell | 2.93e-10 | 361 |
defensive cell | 4.43e-10 | 48 |
phagocyte | 4.43e-10 | 48 |
classical monocyte | 4.65e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-10 | 42 |
macrophage dendritic cell progenitor | 4.91e-10 | 61 |
somatic stem cell | 1.04e-09 | 433 |
multi fate stem cell | 1.27e-09 | 427 |
myeloid lineage restricted progenitor cell | 1.05e-08 | 66 |
stem cell | 1.24e-08 | 441 |
granulocyte monocyte progenitor cell | 3.33e-08 | 67 |
CD8-positive, alpha-beta T cell | 8.42e-08 | 11 |
motile cell | 3.44e-07 | 386 |
T cell | 5.50e-07 | 25 |
pro-T cell | 5.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.61e-10 | 98 |
blood island | 2.61e-10 | 98 |
connective tissue | 9.24e-10 | 371 |
bone marrow | 2.77e-08 | 76 |
skeletal element | 4.23e-08 | 90 |
hemolymphoid system | 5.30e-08 | 108 |
skeletal system | 5.51e-08 | 100 |
musculoskeletal system | 2.40e-07 | 167 |
bone element | 4.14e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.58e-07 | 31 |