FFCP PHASE1:Hg19::chr6:32811771..32811831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5696 | |EntrezGene=5696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9545 | |HGNC=9545 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JNW7,P28062 | |UniProt=Q5JNW7,P28062 | ||
|association_with_transcript=0bp_to_ENST00000374882,ENST00000395339,NM_148919,uc003oce.2,uc011dqh.1_5end | |association_with_transcript=0bp_to_ENST00000374882,ENST00000395339,NM_148919,uc003oce.2,uc011dqh.1_5end | ||
|cluster_id=chr6:32811771..32811831,- | |||
|coexpression_cluster_id=C1766 | |coexpression_cluster_id=C1766 | ||
|description=CAGE_peak_1_at_PSMB8_5end | |description=CAGE_peak_1_at_PSMB8_5end | ||
|id=chr6:32811771..32811831,- | |id=chr6:32811771..32811831,- | ||
|ontology_enrichment_celltype=CL:0002087!2.56e-40!119;CL:0000738!8.20e-39!140;CL:0000988!1.36e-36!182;CL:0000037!2.84e-35!172;CL:0000566!2.84e-35!172;CL:0002031!7.92e-34!124;CL:0002032!2.91e-33!165;CL:0000837!2.91e-33!165;CL:0002194!1.19e-21!63;CL:0000576!1.19e-21!63;CL:0000040!1.19e-21!63;CL:0000559!1.19e-21!63;CL:0002009!5.49e-21!65;CL:0000766!2.23e-20!76;CL:0000557!5.25e-18!71;CL:0000542!1.91e-17!53;CL:0000051!1.91e-17!53;CL:0002320!2.64e-17!365;CL:0000838!3.13e-17!52;CL:0000839!7.15e-17!70;CL:0002057!9.53e-17!42;CL:0000860!1.08e-16!45;CL:0000134!3.01e-16!358;CL:0000763!5.89e-16!112;CL:0000049!5.89e-16!112;CL:0000003!2.06e-14!722;CL:0000048!4.84e-14!430;CL:0002371!1.32e-13!591;CL:0000723!4.73e-13!436;CL:0000034!1.72e-12!444;CL:0000144!3.19e-12!625;CL:0000219!5.86e-12!390;CL:0000945!7.08e-12!24;CL:0000826!7.08e-12!24;CL:0000063!3.11e-09!578;CL:0000012!3.03e-08!682;CL:0000548!1.14e-07!679;CL:0000004!1.14e-07!679;CL:0000255!1.14e-07!679;CL:0000084!1.15e-07!25;CL:0000827!1.15e-07!25;CL:0000236!9.71e-07!14 | |ontology_enrichment_celltype=CL:0002087!2.56e-40!119;CL:0000738!8.20e-39!140;CL:0000988!1.36e-36!182;CL:0000037!2.84e-35!172;CL:0000566!2.84e-35!172;CL:0002031!7.92e-34!124;CL:0002032!2.91e-33!165;CL:0000837!2.91e-33!165;CL:0002194!1.19e-21!63;CL:0000576!1.19e-21!63;CL:0000040!1.19e-21!63;CL:0000559!1.19e-21!63;CL:0002009!5.49e-21!65;CL:0000766!2.23e-20!76;CL:0000557!5.25e-18!71;CL:0000542!1.91e-17!53;CL:0000051!1.91e-17!53;CL:0002320!2.64e-17!365;CL:0000838!3.13e-17!52;CL:0000839!7.15e-17!70;CL:0002057!9.53e-17!42;CL:0000860!1.08e-16!45;CL:0000134!3.01e-16!358;CL:0000763!5.89e-16!112;CL:0000049!5.89e-16!112;CL:0000003!2.06e-14!722;CL:0000048!4.84e-14!430;CL:0002371!1.32e-13!591;CL:0000723!4.73e-13!436;CL:0000034!1.72e-12!444;CL:0000144!3.19e-12!625;CL:0000219!5.86e-12!390;CL:0000945!7.08e-12!24;CL:0000826!7.08e-12!24;CL:0000063!3.11e-09!578;CL:0000012!3.03e-08!682;CL:0000548!1.14e-07!679;CL:0000004!1.14e-07!679;CL:0000255!1.14e-07!679;CL:0000084!1.15e-07!25;CL:0000827!1.15e-07!25;CL:0000236!9.71e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.44e-12;48!CL:0000945;6.85e-12;24!CL:0000473;9.39e-12;39!CL:0000234;9.39e-12;39!CL:0000860;1.26e-11;33!CL:0002057;1.26e-11;33!CL:0002087;6.34e-11;104!CL:0000542;7.36e-11;53!CL:0000738;2.33e-09;136!CL:0000766;5.31e-09;69!CL:0000084;1.14e-07;25!CL:0000988;1.51e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.26e-41,115;CL:0000738,2.70e-39,136;CL:0000988,2.17e-36,177;CL:0000037,1.79e-35,168;CL:0002031,2.52e-34,120;CL:0002032,1.83e-33,161;CL:0000837,1.83e-33,161;CL:0002194,1.91e-22,59;CL:0000576,1.91e-22,59;CL:0000040,1.91e-22,59;CL:0000559,1.91e-22,59;CL:0002009,1.03e-21,61;CL:0000766,6.31e-21,72;CL:0000473,5.78e-19,48;CL:0000234,5.78e-19,48;CL:0000557,1.63e-18,67;CL:0000542,1.90e-17,53;CL:0000051,1.90e-17,53;CL:0000839,2.41e-17,66;CL:0000838,3.12e-17,52;CL:0000860,9.50e-17,42;CL:0002057,9.50e-17,42;CL:0002320,1.20e-16,361;CL:0000763,4.37e-16,108;CL:0000049,4.37e-16,108;CL:0000134,1.29e-15,354;CL:0000048,2.01e-13,427;CL:0000723,1.89e-12,433;CL:0000034,6.70e-12,441;CL:0000945,7.06e-12,24;CL:0000826,7.06e-12,24;CL:0000219,2.02e-11,386;CL:0000084,1.15e-07,25;CL:0000827,1.15e-07,25;CL:0000236,9.70e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-12;42!CL:0000051;7.36e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!6.19e-07!51;DOID:0060083!6.19e-07!51 | |ontology_enrichment_disease=DOID:2531!6.19e-07!51;DOID:0060083!6.19e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.77e-07,51;DOID:0060083,6.77e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.71e-27!112;UBERON:0002390!2.88e-25!102;UBERON:0003061!2.88e-25!102;UBERON:0002405!2.26e-20!115;UBERON:0002371!1.34e-17!80;UBERON:0002384!2.79e-16!375;UBERON:0001474!3.82e-14!86;UBERON:0003081!2.63e-13!216;UBERON:0004765!2.14e-11!101;UBERON:0001434!2.14e-11!101;UBERON:0002204!7.05e-08!167;UBERON:0000178!1.84e-07!15;UBERON:0000179!1.84e-07!15;UBERON:0000463!1.84e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!3.71e-27!112;UBERON:0002390!2.88e-25!102;UBERON:0003061!2.88e-25!102;UBERON:0002405!2.26e-20!115;UBERON:0002371!1.34e-17!80;UBERON:0002384!2.79e-16!375;UBERON:0001474!3.82e-14!86;UBERON:0003081!2.63e-13!216;UBERON:0004765!2.14e-11!101;UBERON:0001434!2.14e-11!101;UBERON:0002204!7.05e-08!167;UBERON:0000178!1.84e-07!15;UBERON:0000179!1.84e-07!15;UBERON:0000463!1.84e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-07;15!UBERON:0000179;1.81e-07;15!UBERON:0000463;1.81e-07;15 | |||
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| ||
|short_description=p1@PSMB8 | |short_description=p1@PSMB8 | ||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p1@PSMB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMB8_5end |
Coexpression cluster: | C1766_CD14_CD14CD16_Hair_CD8_CD19_xeroderma_CD4 |
Association with transcript: | 0bp_to_ENST00000374882, ENST00000395339, NM_148919, uc003oce.2, uc011dqh.1_5end |
EntrezGene: | PSMB8 |
HGNC: | 9545 |
UniProt: | Q5JNW7P28062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.37e-27 | 108 |
hematopoietic system | 9.97e-26 | 98 |
blood island | 9.97e-26 | 98 |
immune system | 2.43e-21 | 93 |
bone marrow | 5.29e-18 | 76 |
connective tissue | 1.20e-15 | 371 |
bone element | 2.11e-14 | 82 |
skeletal element | 6.99e-14 | 90 |
lateral plate mesoderm | 4.34e-12 | 203 |
skeletal system | 7.65e-12 | 100 |
musculoskeletal system | 4.02e-08 | 167 |
blood | 1.84e-07 | 15 |
haemolymphatic fluid | 1.84e-07 | 15 |
organism substance | 1.84e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.77e-07 | 51 |
immune system cancer | 6.77e-07 | 51 |