FFCP PHASE1:Hg19::chr7:29233853..29233864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=P52757 | |UniProt=P52757 | ||
|association_with_transcript=-163bp_to_ENST00000222792_5end | |association_with_transcript=-163bp_to_ENST00000222792_5end | ||
|cluster_id=chr7:29233853..29233864,+ | |||
|coexpression_cluster_id=C1458 | |coexpression_cluster_id=C1458 | ||
|description=CAGE_peak_15_at_CHN2_5end | |description=CAGE_peak_15_at_CHN2_5end | ||
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|ontology_enrichment_celltype=CL:0002579!3.96e-07!3;CL:0002541!5.07e-07!3 | |ontology_enrichment_celltype=CL:0002579!3.96e-07!3;CL:0002541!5.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;5.56e-12;3!CL:0002334;2.42e-11;12!CL:0002581;1.30e-09;1!CL:0000097;1.55e-07;5 | |ontology_enrichment_celltype_v019=CL:0002579;5.56e-12;3!CL:0002334;2.42e-11;12!CL:0002581;1.30e-09;1!CL:0000097;1.55e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,6.23e-12,3;CL:0002334,2.39e-11,12;CL:0002581,1.06e-09,1;CL:0000097,1.32e-07,5;CL:0002028,1.32e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.51e-27;3 | |ontology_enrichment_development_v019=UBERON:0006215;9.51e-27;3 | ||
|ontology_enrichment_disease=DOID:171!4.72e-07!10 | |ontology_enrichment_disease=DOID:171!4.72e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.12e-13;6!UBERON:0003688;5.62e-13;6!UBERON:0002358;5.62e-13;6!UBERON:0003684;5.62e-13;6!UBERON:0001178;5.62e-13;6!UBERON:0004733;1.09e-11;12!UBERON:0002028;1.09e-11;12!UBERON:0004732;8.44e-11;13!UBERON:0002680;2.76e-09;9!UBERON:0001895;2.76e-09;9!UBERON:0004457;7.95e-09;9!UBERON:0000042;7.95e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.12e-13;6!UBERON:0003688;5.62e-13;6!UBERON:0002358;5.62e-13;6!UBERON:0003684;5.62e-13;6!UBERON:0001178;5.62e-13;6!UBERON:0004733;1.09e-11;12!UBERON:0002028;1.09e-11;12!UBERON:0004732;8.44e-11;13!UBERON:0002680;2.76e-09;9!UBERON:0001895;2.76e-09;9!UBERON:0004457;7.95e-09;9!UBERON:0000042;7.95e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.13e-13,6;UBERON:0006215,1.13e-13,6;UBERON:0003688,6.78e-13,6;UBERON:0002358,6.78e-13,6;UBERON:0003684,6.78e-13,6;UBERON:0001178,6.78e-13,6;UBERON:0004733,1.31e-11,12;UBERON:0002028,1.31e-11,12;UBERON:0007277,1.31e-11,12;UBERON:0004732,9.96e-11,13;UBERON:0003076,2.57e-09,15;UBERON:0003057,2.57e-09,15;UBERON:0002680,2.77e-09,9;UBERON:0001895,2.77e-09,9;UBERON:0010092,2.77e-09,9 | |||
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|short_description=p15@CHN2 | |short_description=p15@CHN2 | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p15@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CHN2_5end |
Coexpression cluster: | C1458_cerebellum_small_temporal_parietal_occipital_somatostatinoma_neuroectodermal |
Association with transcript: | -163bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 6.23e-12 | 3 |
preadipocyte | 2.39e-11 | 12 |
perirenal preadipocyte | 1.06e-09 | 1 |
mast cell | 1.32e-07 | 5 |
basophil mast progenitor cell | 1.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.13e-13 | 6 |
rhombic lip | 1.13e-13 | 6 |
omentum | 6.78e-13 | 6 |
peritoneum | 6.78e-13 | 6 |
abdominal cavity | 6.78e-13 | 6 |
visceral peritoneum | 6.78e-13 | 6 |
segmental subdivision of hindbrain | 1.31e-11 | 12 |
hindbrain | 1.31e-11 | 12 |
presumptive hindbrain | 1.31e-11 | 12 |
segmental subdivision of nervous system | 9.96e-11 | 13 |
posterior neural tube | 2.57e-09 | 15 |
chordal neural plate | 2.57e-09 | 15 |
regional part of metencephalon | 2.77e-09 | 9 |
metencephalon | 2.77e-09 | 9 |
future metencephalon | 2.77e-09 | 9 |