FFCP PHASE1:Hg19::chr9:90589138..90589175,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:90589138..90589175,-
|short_description=p4@CDK20
|description=CAGE_peak_4_at_CDK20_5end
|association_with_transcript=273bp_to_AK226135_5end
|EntrezGene=23...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23552 | |EntrezGene=23552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21420 | |HGNC=21420 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=273bp_to_AK226135_5end | |||
|cluster_id=chr9:90589138..90589175,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_CDK20_5end | |||
|id=chr9:90589138..90589175,- | |||
|ontology_enrichment_celltype=CL:0002057!7.79e-74!42;CL:0002194!1.98e-72!63;CL:0000576!1.98e-72!63;CL:0000040!1.98e-72!63;CL:0000559!1.98e-72!63;CL:0000766!4.39e-70!76;CL:0002009!1.08e-69!65;CL:0000860!6.40e-68!45;CL:0000839!6.63e-66!70;CL:0000557!9.73e-65!71;CL:0000763!6.47e-55!112;CL:0000049!6.47e-55!112;CL:0002087!1.18e-42!119;CL:0000738!5.43e-41!140;CL:0000037!2.17e-40!172;CL:0000566!2.17e-40!172;CL:0002032!8.48e-39!165;CL:0000837!8.48e-39!165;CL:0002031!1.43e-38!124;CL:0000988!5.58e-37!182;CL:0002393!1.93e-15!9;CL:0002397!1.93e-15!9;CL:0000134!6.52e-11!358;CL:0002320!2.49e-10!365;CL:0000219!8.93e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-95;33!CL:0002057;3.78e-95;33!CL:0000473;3.62e-79;39!CL:0000234;3.62e-79;39!CL:0000576;3.50e-75;48!CL:0000766;2.69e-53;69!CL:0000763;1.09e-29;100!CL:0002087;2.19e-18;104!CL:0002393;3.73e-15;6!CL:0002397;3.73e-15;6!CL:0000738;1.32e-13;136!CL:0000767;2.36e-12;3!CL:0000988;1.90e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.85e-123,48;CL:0000234,2.85e-123,48;CL:0000860,1.10e-121,42;CL:0002057,1.10e-121,42;CL:0002194,3.74e-113,59;CL:0000576,3.74e-113,59;CL:0000040,3.74e-113,59;CL:0000559,3.74e-113,59;CL:0002009,3.34e-109,61;CL:0000766,1.73e-105,72;CL:0000839,2.35e-100,66;CL:0000557,9.65e-99,67;CL:0000763,2.20e-84,108;CL:0000049,2.20e-84,108;CL:0002087,7.89e-57,115;CL:0002032,5.13e-56,161;CL:0000837,5.13e-56,161;CL:0000738,2.71e-54,136;CL:0002031,4.36e-54,120;CL:0000037,2.76e-53,168;CL:0000988,4.33e-50,177;CL:0000134,4.36e-20,354;CL:0002320,1.68e-19,361;CL:0002393,3.49e-19,9;CL:0002397,3.49e-19,9;CL:0000219,1.96e-17,386;CL:0000048,6.61e-15,427;CL:0000723,1.48e-14,433;CL:0000034,4.18e-14,441;CL:0000767,2.76e-12,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-91;42!CL:0000049;1.45e-26;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.96e-58!80;UBERON:0001474!1.22e-52!86;UBERON:0002390!1.55e-50!102;UBERON:0003061!1.55e-50!102;UBERON:0002193!2.25e-44!112;UBERON:0004765!2.90e-42!101;UBERON:0001434!2.90e-42!101;UBERON:0002405!2.24e-39!115;UBERON:0002204!5.58e-20!167;UBERON:0003081!2.38e-15!216;UBERON:0002384!5.01e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-86,76;UBERON:0001474,3.34e-79,82;UBERON:0004765,2.06e-71,90;UBERON:0002405,7.81e-69,93;UBERON:0002390,7.00e-65,98;UBERON:0003061,7.00e-65,98;UBERON:0001434,2.07e-63,100;UBERON:0002193,4.61e-58,108;UBERON:0002204,2.43e-34,167;UBERON:0003081,1.34e-26,203;UBERON:0002384,1.06e-18,371;UBERON:0000926,8.75e-14,315;UBERON:0004120,8.75e-14,315;UBERON:0006603,8.75e-14,315 | |||
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| ||
|short_description=p4@CDK20 | |||
}} | }} |
Latest revision as of 03:52, 18 September 2015
Short description: | p4@CDK20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDK20_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 273bp_to_AK226135_5end |
EntrezGene: | CDK20 |
HGNC: | 21420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-86 | 76 |
bone element | 3.34e-79 | 82 |
skeletal element | 2.06e-71 | 90 |
immune system | 7.81e-69 | 93 |
hematopoietic system | 7.00e-65 | 98 |
blood island | 7.00e-65 | 98 |
skeletal system | 2.07e-63 | 100 |
hemolymphoid system | 4.61e-58 | 108 |
musculoskeletal system | 2.43e-34 | 167 |
lateral plate mesoderm | 1.34e-26 | 203 |
connective tissue | 1.06e-18 | 371 |
mesoderm | 8.75e-14 | 315 |
mesoderm-derived structure | 8.75e-14 | 315 |
presumptive mesoderm | 8.75e-14 | 315 |