FFCP PHASE1:Hg19::chr3:39233987..39233993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165904 | |EntrezGene=165904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14301 | |HGNC=14301 | ||
|TSSclassifier=strong | |||
|UniProt=Q702N8 | |UniProt=Q702N8 | ||
|association_with_transcript=83bp_to_NM_194293,uc003cji.2,uc003cjj.2,uc003cjk.1_5end | |association_with_transcript=83bp_to_NM_194293,uc003cji.2,uc003cjj.2,uc003cjk.1_5end | ||
|cluster_id=chr3:39233987..39233993,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_14_at_XIRP1_5end | |description=CAGE_peak_14_at_XIRP1_5end | ||
Latest revision as of 03:52, 18 September 2015
| Short description: | p14@XIRP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_XIRP1_5end |
| Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
| Association with transcript: | 83bp_to_NM_194293, uc003cji.2, uc003cjj.2, uc003cjk.1_5end |
| EntrezGene: | XIRP1 |
| HGNC: | 14301 |
| UniProt: | Q702N8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p14@XIRP1 |
|---|
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 1.40e-14 | 5 |
| basophil mast progenitor cell | 1.40e-14 | 5 |
| endocrine cell | 1.04e-08 | 9 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| tricuspid valve | 4.66e-66 | 1 |
| right atrium valve | 4.66e-66 | 1 |
| outflow tract of atrium | 4.66e-66 | 1 |
| outflow part of right atrium | 4.66e-66 | 1 |
| right cardiac atrium | 4.66e-66 | 1 |
| cardiac atrium | 7.05e-34 | 2 |
| atrioventricular valve | 7.05e-34 | 2 |
| future cardiac atrium | 7.05e-34 | 2 |
| valve | 4.09e-23 | 3 |
| cardiac mesenchyme | 4.09e-23 | 3 |
Showing 1 to 10 of 22 entries
