FFCP PHASE1:Hg19::chr9:90589123..90589136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23552 | |EntrezGene=23552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21420 | |HGNC=21420 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=312bp_to_AK226135_5end | |association_with_transcript=312bp_to_AK226135_5end | ||
|cluster_id=chr9:90589123..90589136,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_8_at_CDK20_5end | |description=CAGE_peak_8_at_CDK20_5end | ||
|id=chr9:90589123..90589136,- | |id=chr9:90589123..90589136,- | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-58!42;CL:0000860!6.47e-54!45;CL:0002009!6.94e-46!65;CL:0002194!3.90e-45!63;CL:0000576!3.90e-45!63;CL:0000040!3.90e-45!63;CL:0000559!3.90e-45!63;CL:0000766!2.37e-42!76;CL:0000557!4.69e-41!71;CL:0000839!1.60e-39!70;CL:0000763!7.92e-35!112;CL:0000049!7.92e-35!112;CL:0002087!5.50e-27!119;CL:0000738!2.14e-26!140;CL:0000037!5.75e-25!172;CL:0000566!5.75e-25!172;CL:0002032!3.52e-24!165;CL:0000837!3.52e-24!165;CL:0002031!4.88e-24!124;CL:0000988!8.53e-23!182;CL:0002393!2.11e-11!9;CL:0002397!2.11e-11!9;CL:0000767!7.91e-08!3;CL:0000875!4.55e-07!3;CL:0002396!4.55e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.53e-58!42;CL:0000860!6.47e-54!45;CL:0002009!6.94e-46!65;CL:0002194!3.90e-45!63;CL:0000576!3.90e-45!63;CL:0000040!3.90e-45!63;CL:0000559!3.90e-45!63;CL:0000766!2.37e-42!76;CL:0000557!4.69e-41!71;CL:0000839!1.60e-39!70;CL:0000763!7.92e-35!112;CL:0000049!7.92e-35!112;CL:0002087!5.50e-27!119;CL:0000738!2.14e-26!140;CL:0000037!5.75e-25!172;CL:0000566!5.75e-25!172;CL:0002032!3.52e-24!165;CL:0000837!3.52e-24!165;CL:0002031!4.88e-24!124;CL:0000988!8.53e-23!182;CL:0002393!2.11e-11!9;CL:0002397!2.11e-11!9;CL:0000767!7.91e-08!3;CL:0000875!4.55e-07!3;CL:0002396!4.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-70;33!CL:0002057;1.48e-70;33!CL:0000473;2.48e-51;39!CL:0000234;2.48e-51;39!CL:0000576;1.10e-43;48!CL:0000766;2.30e-30;69!CL:0000763;4.11e-15;100!CL:0002087;6.52e-11;104!CL:0000817;7.97e-10;1!CL:0000738;6.86e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.31e-61,59;CL:0000576,8.31e-61,59;CL:0000040,8.31e-61,59;CL:0000559,8.31e-61,59;CL:0002009,9.78e-59,61;CL:0000860,1.22e-58,42;CL:0002057,1.22e-58,42;CL:0000473,5.12e-57,48;CL:0000234,5.12e-57,48;CL:0000766,4.03e-54,72;CL:0000839,4.24e-54,66;CL:0000557,2.97e-53,67;CL:0000763,1.68e-38,108;CL:0000049,1.68e-38,108;CL:0002087,6.58e-33,115;CL:0002031,2.12e-31,120;CL:0000738,5.79e-30,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-45;42!CL:0000049;7.73e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.25e-46,76;UBERON:0001474,5.22e-43,82;UBERON:0004765,6.36e-39,90;UBERON:0002405,1.44e-37,93;UBERON:0002390,1.70e-35,98;UBERON:0003061,1.70e-35,98;UBERON:0001434,1.01e-34,100;UBERON:0002193,6.46e-32,108;UBERON:0002204,1.91e-19,167;UBERON:0003081,2.30e-15,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.42e-08,315;UBERON:0004120,1.42e-08,315;UBERON:0006603,1.42e-08,315 | |||
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| ||
|short_description=p8@CDK20 | |short_description=p8@CDK20 | ||
}} | }} |
Latest revision as of 03:52, 18 September 2015
Short description: | p8@CDK20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDK20_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 312bp_to_AK226135_5end |
EntrezGene: | CDK20 |
HGNC: | 21420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.31e-61 | 59 |
monocyte | 8.31e-61 | 59 |
monoblast | 8.31e-61 | 59 |
promonocyte | 8.31e-61 | 59 |
macrophage dendritic cell progenitor | 9.78e-59 | 61 |
classical monocyte | 1.22e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-58 | 42 |
defensive cell | 5.12e-57 | 48 |
phagocyte | 5.12e-57 | 48 |
myeloid leukocyte | 4.03e-54 | 72 |
myeloid lineage restricted progenitor cell | 4.24e-54 | 66 |
granulocyte monocyte progenitor cell | 2.97e-53 | 67 |
myeloid cell | 1.68e-38 | 108 |
common myeloid progenitor | 1.68e-38 | 108 |
nongranular leukocyte | 6.58e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-31 | 120 |
leukocyte | 5.79e-30 | 136 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.25e-46 | 76 |
bone element | 5.22e-43 | 82 |
skeletal element | 6.36e-39 | 90 |
immune system | 1.44e-37 | 93 |
hematopoietic system | 1.70e-35 | 98 |
blood island | 1.70e-35 | 98 |
skeletal system | 1.01e-34 | 100 |
hemolymphoid system | 6.46e-32 | 108 |
musculoskeletal system | 1.91e-19 | 167 |
lateral plate mesoderm | 2.30e-15 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.42e-08 | 315 |
mesoderm-derived structure | 1.42e-08 | 315 |
presumptive mesoderm | 1.42e-08 | 315 |