FFCP PHASE1:Hg19::chr7:29186008..29186172,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14399 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H3G5,F5H6K4 | |||
|association_with_transcript=0bp_to_ENST00000265394,ENST00000396276,ENST00000542995,NM_019029,NM_031311,uc003szv.2,uc003szw.2_5end | |||
|cluster_id=chr7:29186008..29186172,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CPVL_5end | |||
|id=chr7:29186008..29186172,- | |||
|ontology_enrichment_celltype=CL:0002009!1.08e-34!65;CL:0002194!3.18e-33!63;CL:0000576!3.18e-33!63;CL:0000040!3.18e-33!63;CL:0000559!3.18e-33!63;CL:0000557!4.58e-31!71;CL:0000839!2.49e-30!70;CL:0002057!4.87e-28!42;CL:0000860!6.97e-28!45;CL:0000766!3.28e-27!76;CL:0000763!7.86e-19!112;CL:0000049!7.86e-19!112;CL:0002087!3.09e-17!119;CL:0000738!1.13e-16!140;CL:0002031!4.23e-16!124;CL:0000037!4.72e-13!172;CL:0000566!4.72e-13!172;CL:0002032!3.50e-11!165;CL:0000837!3.50e-11!165;CL:0000988!2.08e-10!182;CL:0002393!5.81e-07!9;CL:0002397!5.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-21;33!CL:0002057;2.08e-21;33!CL:0000473;5.21e-21;39!CL:0000234;5.21e-21;39!CL:0000576;1.31e-20;48!CL:0000766;3.09e-13;69!CL:0000763;1.51e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.26e-38,61;CL:0002194,2.63e-36,59;CL:0000576,2.63e-36,59;CL:0000040,2.63e-36,59;CL:0000559,2.63e-36,59;CL:0000557,4.00e-33,67;CL:0000473,4.76e-33,48;CL:0000234,4.76e-33,48;CL:0000839,2.42e-32,66;CL:0000766,2.38e-29,72;CL:0000860,2.39e-29,42;CL:0002057,2.39e-29,42;CL:0000763,1.69e-20,108;CL:0000049,1.69e-20,108;CL:0002087,3.74e-18,115;CL:0000738,1.81e-17,136;CL:0002031,1.31e-16,120;CL:0000037,5.88e-14,168;CL:0002032,5.81e-12,161;CL:0000837,5.81e-12,161;CL:0000988,4.25e-11,177;CL:0002393,3.14e-07,9;CL:0002397,3.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-21;42!CL:0000049;5.91e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.35e-27!102;UBERON:0003061!3.35e-27!102;UBERON:0002371!1.51e-23!80;UBERON:0002193!3.20e-23!112;UBERON:0001474!6.47e-23!86;UBERON:0007023!7.64e-21!115;UBERON:0002405!3.17e-19!115;UBERON:0004765!5.33e-16!101;UBERON:0001434!5.33e-16!101;UBERON:0000062!7.06e-09!511;UBERON:0000922!1.31e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-29,98;UBERON:0003061,2.72e-29,98;UBERON:0002371,9.68e-26,76;UBERON:0002193,1.81e-25,108;UBERON:0001474,3.55e-25,82;UBERON:0007023,5.88e-22,114;UBERON:0002405,1.95e-21,93;UBERON:0004765,2.03e-20,90;UBERON:0001434,3.68e-16,100 | |||
|phase1_expression=1.45342703416445,1.07050261945492,6.3429481843187,4.00293193412522,0,4.36169262050184,0,0.631719873426831,0.783556884599516,0,0,5.46103430325431,2.11013582582763,0,0,2.6893005858071,0,0,0,5.0479633811483,1.22400414746552,1.56727360739044,7.44213566540748,5.06435372769671,5.39833350257652,0,0,0,208.876431006768,114.381160632969,327.126468566869,0,0.30120591877825,0,0,0,30.828046130159,228.800103723665,254.29035939214,229.597501217371,403.047853631864,304.460046057841,601.438950425826,324.383470717209,257.711393595768,190.671072093624,339.811251956111,233.132192508375,217.104165997468,415.715506905507,325.067936585429,325.399548326693,393.699567401218,220.755761785669,207.202524489343,352.013174944671,267.720933206747,295.736105529731,440.7608050141,275.678034258364,245.505456306832,378.999143914537,319.740243167476,242.09565830257,512.799724656708,277.451374873967,230.444232128363,372.853019241007,304.024541438977,319.267601716521,440.125438414459,327.030540756957,327.222108613875,361.880305452356,375.033985138337,522.469344606873,376.750228865345,486.122602127956,298.628140083175,139.656244433212,155.353924892489,174.992259306519,1.75996244461323,3.27683166757279,0,29.444385357089,3.2031678962881,5.17277195959035,9.25462821898807,3.81621501814146,0,8.80855784056408,2.6759125968766,14.5388461436928,35.8725480308183,51.6232806159151,0.983548850569165,0.786021525498329,2.2616164889946,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,10.5126586726952,1.30216690771284,1.90090408889675,34.7828525069655,22.1416837297144,23.7368380449457,26.5190522289299,5.74789597844733,0,0,0.144824403882799,2.43806866313962,2.01210257911091,2.17366355134002,0,0,0,0,0.486634870302636,9.64255135073492,3.54767035940102,9.39832206916449,25.1479824955608,0.728590576585084,0.741568885568859,49.9802986228212,51.0200130286853,127.639642098111,24.8030249277556,23.4517913419852,21.5445350771148,0,0,0,0,0,0,0,3.35941786920128,9.24992282985447,0,0.402829317109147,0.760272105718513,2.4406205754817,0,0,1.69669483739752,0.673588117878509,1.12611480483322,0,0,0,9.22462922052443,0,0,0,0.12663051166458,0.132409180813219,0,6.02936249737207,4.48542080113846,0,7.15335890409764,1.24484414159907,0,0,8.77873080340602,5.76175924479999,1.40592859100278,0,0,0,0.587172493218824,0.971237666208789,0.561803226808994,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,0.545492241181669,4.58887352622406,19.3938192746057,14.1806852103989,20.4501339450352,22.4944489383354,28.2599352980704,14.2341170039574,0,0,0,0,0,5.20549920175313,4.21461725195254,5.06123162755312,4.30146493656336,3.26819166138609,4.50814176311084,4.58426447744559,3.13954344200554,4.61696588335668,8.85786545549578,0,0,0,1.26755034821831,10.8110993834539,12.9973779469909,15.8926715789274,133.442455819278,18.0146200813452,0.219500570817251,1.1240175325762,0.804231779293047,5.09236448371913,0,0,7.21656710126366,11.9408317124329,4.69634776943287,0,0,0,0,0,203.129030022103,51.9489468609108,109.689797769081,3.74935335947108,0.16798212819886,0,0,0,0,0,0.088048434013226,1.24396869324463,2.16179930125442,0.88369703398466,3.36538839748496,4.20187268114105,14.0660936652056,0,0.616964956219941,0.300343057843917,0.285826432630578,5.49442313292267,14.8226423403315,7.1871520104531,0.129271715757778,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,1.64648067356154,1.62868092146868,0,3.16780749173372,12.6604538365026,6.97226766880235,7.49797433865428,457.305415210876,342.53933635671,191.858884929559,0.239624855491583,0,0,1.15825045334063,5.75333703141074,2.32779252211864,0.336255431980582,13.7921532141349,2.58753089831421,22.0750022401167,13.4670150837906,3.90419561572865,0.773288812777695,4.02039036802437,1.91381625495949,0,0,0,1.2269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0.356857977594324,0,0,0,2.27407504055985,1.03473071292505,0,0,0,0.195801157462741,0,133.985680927631,169.551361843433,133.729629927716,1.21251028578504,0,4.23346410661552,0,2.30192959932094,1.12264037773229,3.07533958213682,3.07024349440022,0.160853921143607,2.96836132889982,0,0.355123450626254,0,0,0.116210378459959,125.93554647447,0.40101294060657,0,0.114814448164607,0.182091168006717,0.262248829918848,3.15839729035188,5.54510427151786,2.35304930753057,4.38417673959782,8.97188845589443,1.13733384070897,1.53084334748864,1.51141141271498,0,0,0.501689773854853,12.2340611061618,8.31076008928724,2.91037181138832,30.9156426070768,34.5094795352869,28.7224140130356,7.54433685109323,11.3882438132506,49.4596855909067,21.9766715564024,30.1159674710146,0,0.650060246036521,0,0.096670718292122,1.69453478826109,1.5350367472613,0.275673144969061,0,1.88521702088497,3.15338521439573,1.78064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,18.6079184679834,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655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| |||
|short_description=p1@CPVL | |||
}} |
Latest revision as of 03:48, 18 September 2015
Short description: | p1@CPVL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPVL_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000265394, ENST00000396276, ENST00000542995, NM_019029, NM_031311, uc003szv.2, uc003szw.2_5end |
EntrezGene: | CPVL |
HGNC: | 14399 |
UniProt: | Q9H3G5F5H6K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 7.26e-38 | 61 |
monopoietic cell | 2.63e-36 | 59 |
monocyte | 2.63e-36 | 59 |
monoblast | 2.63e-36 | 59 |
promonocyte | 2.63e-36 | 59 |
granulocyte monocyte progenitor cell | 4.00e-33 | 67 |
defensive cell | 4.76e-33 | 48 |
phagocyte | 4.76e-33 | 48 |
myeloid lineage restricted progenitor cell | 2.42e-32 | 66 |
myeloid leukocyte | 2.38e-29 | 72 |
classical monocyte | 2.39e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-29 | 42 |
myeloid cell | 1.69e-20 | 108 |
common myeloid progenitor | 1.69e-20 | 108 |
nongranular leukocyte | 3.74e-18 | 115 |
leukocyte | 1.81e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.31e-16 | 120 |
hematopoietic stem cell | 5.88e-14 | 168 |
hematopoietic oligopotent progenitor cell | 5.81e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.81e-12 | 161 |
hematopoietic cell | 4.25e-11 | 177 |
intermediate monocyte | 3.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.72e-29 | 98 |
blood island | 2.72e-29 | 98 |
bone marrow | 9.68e-26 | 76 |
hemolymphoid system | 1.81e-25 | 108 |
bone element | 3.55e-25 | 82 |
adult organism | 5.88e-22 | 114 |
immune system | 1.95e-21 | 93 |
skeletal element | 2.03e-20 | 90 |
skeletal system | 3.68e-16 | 100 |