FFCP PHASE1:Hg19::chr13:88323415..88323434,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:88323415..88323434,- to FFCP PHASE1:Hg19::chr13:88323415..88323434,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42773 | |HGNC=42773 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000453832_5end | |||
|cluster_id=chr13:88323415..88323434,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_MIR4500HG_5end | |||
|id=chr13:88323415..88323434,- | |||
|ontology_enrichment_celltype=CL:0000064!6.48e-07!3;CL:0005012!6.48e-07!3;CL:0000067!6.48e-07!3;CL:0002304!6.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.34e-10;3!CL:0000067;3.34e-10;3!CL:0005012;3.34e-10;3!CL:0002304;3.34e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.31e-10,3;CL:0000067,4.31e-10,3;CL:0005012,4.31e-10,3;CL:0002304,4.31e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.11e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-36!57;UBERON:0005068!1.03e-36!57;UBERON:0006241!1.03e-36!57;UBERON:0007135!1.03e-36!57;UBERON:0003075!1.91e-36!86;UBERON:0007284!1.91e-36!86;UBERON:0002619!3.97e-36!22;UBERON:0002346!7.22e-36!90;UBERON:0001893!2.28e-33!34;UBERON:0001869!3.14e-33!32;UBERON:0001950!1.35e-32!20;UBERON:0002791!1.21e-31!33;UBERON:0000956!3.94e-31!25;UBERON:0000203!3.94e-31!25;UBERON:0002020!2.01e-30!34;UBERON:0003528!2.01e-30!34;UBERON:0001017!1.47e-29!82;UBERON:0005743!4.84e-29!86;UBERON:0002616!1.32e-28!59;UBERON:0002780!2.34e-28!41;UBERON:0001890!2.34e-28!41;UBERON:0006240!2.34e-28!41;UBERON:0000073!4.34e-28!94;UBERON:0001016!4.34e-28!94;UBERON:0003056!5.63e-28!61;UBERON:0000955!1.11e-27!69;UBERON:0006238!1.11e-27!69;UBERON:0003080!1.72e-27!42;UBERON:0000153!5.55e-24!129;UBERON:0007811!5.55e-24!129;UBERON:0000033!1.72e-23!123;UBERON:0007023!9.45e-20!115;UBERON:0000924!1.25e-19!173;UBERON:0006601!1.25e-19!173;UBERON:0004121!1.65e-19!169;UBERON:0000200!5.11e-13!6;UBERON:0001871!1.04e-12!7;UBERON:0001872!9.68e-11!5;UBERON:0000349!1.35e-10!5;UBERON:0000475!1.42e-10!365;UBERON:0003076!3.37e-10!15;UBERON:0003057!3.37e-10!15;UBERON:0000483!7.07e-09!309;UBERON:0000064!1.20e-08!219;UBERON:0000119!1.21e-08!312;UBERON:0000481!1.97e-08!347;UBERON:0000488!3.03e-08!4;UBERON:0000477!4.06e-08!286;UBERON:0000025!1.35e-07!194;UBERON:0002771!2.12e-07!3;UBERON:0001778!6.48e-07!3;UBERON:0001775!6.48e-07!3;UBERON:0002240!6.87e-07!3;UBERON:0002021!8.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.14e-75;22!UBERON:0001950;2.18e-72;20!UBERON:0000956;6.91e-66;25!UBERON:0000203;6.91e-66;25!UBERON:0001869;1.51e-59;32!UBERON:0002791;2.25e-52;32!UBERON:0001893;1.18e-51;34!UBERON:0003528;2.68e-48;34!UBERON:0002020;2.68e-48;34!UBERON:0000200;1.44e-41;6!UBERON:0002780;1.17e-37;41!UBERON:0001890;1.17e-37;41!UBERON:0001871;7.94e-25;6!UBERON:0001872;2.23e-22;5!UBERON:0001870;2.29e-22;3!UBERON:0000073;2.78e-22;53!UBERON:0002616;2.78e-22;53!UBERON:0001017;2.05e-17;75!UBERON:0000955;6.46e-16;68!UBERON:0002702;1.77e-15;2!UBERON:0002771;3.36e-15;2!UBERON:0000349;9.38e-13;5!UBERON:0001016;1.99e-12;83!UBERON:0001778;3.34e-10;3!UBERON:0001775;3.34e-10;3!UBERON:0002022;1.22e-08;1!UBERON:0003112;1.22e-08;1!UBERON:0011158;1.22e-08;1!UBERON:0003128;1.22e-08;1!UBERON:0001703;1.22e-08;1!UBERON:0002241;1.22e-08;1!UBERON:0002581;4.25e-08;1!UBERON:0001882;4.25e-08;1!UBERON:0007190;4.25e-08;1!UBERON:0005403;4.25e-08;1!UBERON:0000488;7.30e-08;4!UBERON:0011216;1.70e-07;132!UBERON:0007023;6.88e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.05e-75,22;UBERON:0001950,2.20e-72,20;UBERON:0000956,6.83e-66,25;UBERON:0000203,6.83e-66,25;UBERON:0001869,4.17e-65,32;UBERON:0001893,3.42e-61,34;UBERON:0002791,5.83e-58,32;UBERON:0003528,1.83e-54,34;UBERON:0002020,1.83e-54,34;UBERON:0002780,2.01e-50,41;UBERON:0001890,2.01e-50,41;UBERON:0003080,2.01e-50,41;UBERON:0006240,2.01e-50,41;UBERON:0000200,1.44e-41,6;UBERON:0003056,3.63e-41,61;UBERON:0001049,1.62e-40,56;UBERON:0005068,1.62e-40,56;UBERON:0006241,1.62e-40,56;UBERON:0007135,1.62e-40,56;UBERON:0000073,1.88e-38,53;UBERON:0002616,1.88e-38,53;UBERON:0001017,1.98e-36,81;UBERON:0000955,4.52e-36,68;UBERON:0006238,4.52e-36,68;UBERON:0003075,5.04e-33,82;UBERON:0007284,5.04e-33,82;UBERON:0001016,1.82e-32,89;UBERON:0002346,2.53e-31,86;UBERON:0010371,2.86e-25,104;UBERON:0001871,8.38e-25,6;UBERON:0001870,2.14e-22,3;UBERON:0001872,2.24e-22,5;UBERON:0010314,2.84e-21,132;UBERON:0007023,1.87e-20,114;UBERON:0004121,1.22e-18,171;UBERON:0000924,1.22e-18,171;UBERON:0006601,1.22e-18,171;UBERON:0002702,1.43e-15,2;UBERON:0002771,4.16e-15,2;UBERON:0011216,2.85e-13,223;UBERON:0000349,6.64e-13,5;UBERON:0001778,4.31e-10,3;UBERON:0001775,4.31e-10,3;UBERON:0000025,2.35e-09,192;UBERON:0002022,1.05e-08,1;UBERON:0003112,1.31e-08,1;UBERON:0011158,1.31e-08,1;UBERON:0003128,1.31e-08,1;UBERON:0001703,1.31e-08,1;UBERON:0002241,1.31e-08,1;UBERON:0004761,1.31e-08,1;UBERON:0009617,1.31e-08,1;UBERON:0007190,3.10e-08,1;UBERON:0001882,3.57e-08,1;UBERON:0005403,3.57e-08,1;UBERON:0002581,5.82e-08,1;UBERON:0000488,8.83e-08,4;UBERON:0000483,8.80e-07,306;UBERON:0004111,9.31e-07,240 | |||
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| ||
|short_description=p3@MIR4500HG | |||
}} | }} |
Latest revision as of 03:45, 18 September 2015
Short description: | p3@MIR4500HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR4500HG_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -54bp_to_ENST00000453832_5end |
EntrezGene: | NA |
HGNC: | 42773 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.31e-10 | 3 |
ciliated epithelial cell | 4.31e-10 | 3 |
multi-ciliated epithelial cell | 4.31e-10 | 3 |
non-pigmented ciliary epithelial cell | 4.31e-10 | 3 |