FFCP PHASE1:Hg19::chr21:34144332..34144368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94104 | |EntrezGene=94104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13579 | |HGNC=13579 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5B6,Q8N6E6 | |UniProt=Q9Y5B6,Q8N6E6 | ||
|association_with_transcript=-163bp_to_ENST00000331923,NM_013329,NM_016631,NR_027873,uc002yqn.2,uc002yqo.2,uc002yqp.2,uc002yqr.2_5end | |association_with_transcript=-163bp_to_ENST00000331923,NM_013329,NM_016631,NR_027873,uc002yqn.2,uc002yqo.2,uc002yqp.2,uc002yqr.2_5end | ||
|cluster_id=chr21:34144332..34144368,- | |||
|description=CAGE_peak_9_at_GCFC1_5end | |description=CAGE_peak_9_at_GCFC1_5end | ||
|id=chr21:34144332..34144368,- | |id=chr21:34144332..34144368,- | ||
|ontology_enrichment_celltype=CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7 | |ontology_enrichment_celltype=CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.73e-10;7!CL:0000586;8.73e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.55e-10,7;CL:0000586,7.55e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.81e-25;10!UBERON:0005564;2.81e-25;10!UBERON:0005425;3.32e-08;1 | |||
|ontology_enrichment_disease=DOID:162!5.51e-17!235;DOID:14566!2.02e-16!239;DOID:0050687!1.22e-10!143;DOID:305!2.34e-08!106;DOID:3095!3.12e-08!22;DOID:2994!3.12e-08!22;DOID:0050686!7.97e-08!137;DOID:2531!4.30e-07!51;DOID:0060083!4.30e-07!51 | |ontology_enrichment_disease=DOID:162!5.51e-17!235;DOID:14566!2.02e-16!239;DOID:0050687!1.22e-10!143;DOID:305!2.34e-08!106;DOID:3095!3.12e-08!22;DOID:2994!3.12e-08!22;DOID:0050686!7.97e-08!137;DOID:2531!4.30e-07!51;DOID:0060083!4.30e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.49e-16;4!DOID:1325;1.48e-09;7!DOID:3904;1.48e-09;7!DOID:1799;3.32e-08;1!DOID:10165;3.32e-08;1!DOID:1798;3.32e-08;1!DOID:3905;1.56e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.74e-16,4;DOID:1325,1.21e-09,7;DOID:3904,1.21e-09,7;DOID:1799,5.82e-08,1;DOID:10165,5.82e-08,1;DOID:1798,5.82e-08,1;DOID:3905,1.34e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.96e-22;8!UBERON:0003135;2.84e-16;11!UBERON:0000991;8.97e-12;21!UBERON:0000941;3.32e-08;1!UBERON:0001785;3.32e-08;1!UBERON:0002464;3.32e-08;1!UBERON:0004904;3.32e-08;1!UBERON:0001021;3.32e-08;1!UBERON:0003101;5.04e-08;22!UBERON:0000079;5.04e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.52e-22,8;UBERON:0003135,2.36e-16,11;UBERON:0000991,9.91e-12,21;UBERON:0009196,9.91e-12,21;UBERON:0009117,9.91e-12,21;UBERON:0005564,9.91e-12,21;UBERON:0004176,3.58e-11,22;UBERON:0000941,2.17e-08,1;UBERON:0001785,2.17e-08,1;UBERON:0002464,2.17e-08,1;UBERON:0004904,2.17e-08,1;UBERON:0001021,2.17e-08,1;UBERON:0003902,2.17e-08,1;UBERON:0005425,2.17e-08,1;UBERON:0003101,4.62e-08,22;UBERON:0000079,4.62e-08,22;UBERON:0004458,4.95e-08,49 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.502170558379211,0.458480434487708,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.70272798147026,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.09776335516636,0.397589304964456,0.464775771478074,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.448340575974109,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0.557409525377156,0.432807638929335,0.213425530045242,0.159426272728822,0,0,1.2700414963433,0.649243880549111,0,1.14117339516596,0.47003968731907,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0,0,1.6227340708559,0.33307196799782,0,0,0,0.849523652246594,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0.251932747854276,0,0.861593638227486,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.41827123283581,0,0,0.922255617552241,0.179515288819544,0.325942115766024,0,0,0,1.02193298195737,0,0.332423363800313,0.676786981851542,0,0.167821586975843,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.063186579628488,1.20258735531594,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.305994652908965,0.288950589901519,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0.544813624446302,0.803765742325096,1.2378549293751,1.24632101408756,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,2.39460383124975,0.656740165994712,0,0.226624183040251,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0.592834895693833,0.487170393523584,0,0,0,0,0,0.785270481251171,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,1.52183498429854,0.249960815924213,0.151649117541648,0,0,0.468334905806882,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0.314531883711793,0,0.169732529954025,0,0.371807292777007,0,0,0.315446980005013,0,0,0,0.128458450192919,0,1.27707087245721,0,0,0,0.322951291263702,1.42769420259154,0.294443155503077,0,0,0,0,0,0,0,0,0,1.04762677792569,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0.175871244359621,0,1.07140367175657,0.672567444437648,0,0.227662191351298,0,0.345701962667338,0,0,0,0.236387681767936,0.222462803784138,0,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0.790068058663633,0,0,0,0,0,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| |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.502170558379211,0.458480434487708,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.70272798147026,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.09776335516636,0.397589304964456,0.464775771478074,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.448340575974109,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0.557409525377156,0.432807638929335,0.213425530045242,0.159426272728822,0,0,1.2700414963433,0.649243880549111,0,1.14117339516596,0.47003968731907,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0,0,1.6227340708559,0.33307196799782,0,0,0,0.849523652246594,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0.251932747854276,0,0.861593638227486,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.41827123283581,0,0,0.922255617552241,0.179515288819544,0.325942115766024,0,0,0,1.02193298195737,0,0.332423363800313,0.676786981851542,0,0.167821586975843,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.063186579628488,1.20258735531594,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.305994652908965,0.288950589901519,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0.544813624446302,0.803765742325096,1.2378549293751,1.24632101408756,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,2.39460383124975,0.656740165994712,0,0.226624183040251,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0.592834895693833,0.487170393523584,0,0,0,0,0,0.785270481251171,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,1.52183498429854,0.249960815924213,0.151649117541648,0,0,0.468334905806882,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0.314531883711793,0,0.169732529954025,0,0.371807292777007,0,0,0.315446980005013,0,0,0,0.128458450192919,0,1.27707087245721,0,0,0,0.322951291263702,1.42769420259154,0.294443155503077,0,0,0,0,0,0,0,0,0,1.04762677792569,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0.175871244359621,0,1.07140367175657,0.672567444437648,0,0.227662191351298,0,0.345701962667338,0,0,0,0.236387681767936,0.222462803784138,0,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0.790068058663633,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.467878926924211,0.596852325484105,0,1.1294608203896,2.19881033490858,1.96251696636676,0.0771741581079447,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,1.10440093535229,0,0,0,0,0,0,1.00933139868063,0.327796715891087,0.380095503034311,1.32585478664576,3.74104367371785,0.459474497674225,3.25919801080088,2.57647573942014,7.502995644373,0.829169439458779,0.20686599172379,0,0,0.0645889098360061,0,0.33639558774184,0,0,0,0,0,0,0,0.488419611665847,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p9@GCFC1 | |short_description=p9@GCFC1 | ||
}} | }} |
Latest revision as of 03:40, 18 September 2015
Short description: | p9@GCFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GCFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000331923, NM_013329, NM_016631, NR_027873, uc002yqn.2, uc002yqo.2, uc002yqp.2, uc002yqr.2_5end |
EntrezGene: | GCFC1 |
HGNC: | 13579 |
UniProt: | Q9Y5B6Q8N6E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.55e-10 | 7 |
germ cell | 7.55e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.52e-22 | 8 |
male reproductive organ | 2.36e-16 | 11 |
gonad | 9.91e-12 | 21 |
indifferent external genitalia | 9.91e-12 | 21 |
indifferent gonad | 9.91e-12 | 21 |
gonad primordium | 9.91e-12 | 21 |
external genitalia | 3.58e-11 | 22 |
cranial nerve II | 2.17e-08 | 1 |
cranial nerve | 2.17e-08 | 1 |
nerve trunk | 2.17e-08 | 1 |
nerve connecting eye with brain | 2.17e-08 | 1 |
nerve | 2.17e-08 | 1 |
retinal neural layer | 2.17e-08 | 1 |
presumptive neural retina | 2.17e-08 | 1 |
male organism | 4.62e-08 | 22 |
male reproductive system | 4.62e-08 | 22 |
body cavity or lining | 4.95e-08 | 49 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.74e-16 | 4 |
bronchus cancer | 1.21e-09 | 7 |
bronchogenic carcinoma | 1.21e-09 | 7 |
islet cell tumor | 5.82e-08 | 1 |
endocrine pancreas cancer | 5.82e-08 | 1 |
pancreatic endocrine carcinoma | 5.82e-08 | 1 |
lung carcinoma | 1.34e-07 | 9 |