FFCP PHASE1:Hg19::chr9:90342509..90342530,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:90342509..90342530,+
|short_description=p3@CTSL1
|description=CAGE_peak_3_at_CTSL1_5end
|association_with_transcript=0bp_to_AB463468,CR457053,DQ892930,DQ89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1514 | |EntrezGene=1514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2537 | |HGNC=2537 | ||
|TSSclassifier=strong | |||
|UniProt=P07711 | |UniProt=P07711 | ||
|association_with_transcript=0bp_to_AB463468,CR457053,DQ892930,DQ896179_5end | |||
|cluster_id=chr9:90342509..90342530,+ | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_3_at_CTSL1_5end | |||
|id=chr9:90342509..90342530,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.73e-17!63;CL:0000576!9.73e-17!63;CL:0000040!9.73e-17!63;CL:0000559!9.73e-17!63;CL:0002009!1.59e-15!65;CL:0002057!7.08e-15!42;CL:0000860!2.27e-14!45;CL:0000839!7.97e-14!70;CL:0000557!8.85e-13!71;CL:0000766!1.37e-10!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-50;33!CL:0002057;1.20e-50;33!CL:0000473;1.41e-48;39!CL:0000234;1.41e-48;39!CL:0000576;4.82e-22;48!CL:0000766;9.25e-16;69!CL:0000235;2.50e-10;6!CL:0000763;6.39e-08;100!CL:0000135;9.52e-08;3!CL:0000388;9.52e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.62e-51,48;CL:0000234,4.62e-51,48;CL:0000860,3.49e-42,42;CL:0002057,3.49e-42,42;CL:0002194,1.14e-38,59;CL:0000576,1.14e-38,59;CL:0000040,1.14e-38,59;CL:0000559,1.14e-38,59;CL:0002009,4.48e-37,61;CL:0000839,1.65e-33,66;CL:0000557,7.37e-33,67;CL:0000766,6.99e-30,72;CL:0000763,1.21e-16,108;CL:0000049,1.21e-16,108;CL:0002087,4.74e-15,115;CL:0002031,4.95e-14,120;CL:0000134,6.71e-13,354;CL:0002320,2.52e-12,361;CL:0000048,7.19e-12,427;CL:0000723,1.87e-11,433;CL:0000738,2.67e-11,136;CL:0000219,6.29e-11,386;CL:0000034,6.41e-11,441;CL:0000235,2.39e-10,6;CL:0002032,3.40e-08,161;CL:0000837,3.40e-08,161;CL:0000135,8.86e-08,3;CL:0000388,8.86e-08,3;CL:0000037,1.65e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-32;42!CL:0000049;6.29e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.00e-13!167;UBERON:0004765!1.26e-12!101;UBERON:0001434!1.26e-12!101;UBERON:0002371!1.57e-12!80;UBERON:0000926!4.35e-12!448;UBERON:0004120!4.35e-12!448;UBERON:0006603!4.35e-12!448;UBERON:0001474!9.26e-12!86;UBERON:0000062!9.68e-10!511;UBERON:0002405!1.13e-09!115;UBERON:0000467!3.79e-09!625;UBERON:0000480!5.37e-09!626;UBERON:0000468!8.86e-09!659;UBERON:0002390!9.87e-07!102;UBERON:0003061!9.87e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.52e-08;3!UBERON:0000043;9.52e-08;3!UBERON:0007845;9.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-31,76;UBERON:0001474,1.39e-28,82;UBERON:0004765,4.17e-25,90;UBERON:0001434,2.68e-24,100;UBERON:0002405,5.87e-24,93;UBERON:0002390,3.34e-22,98;UBERON:0003061,3.34e-22,98;UBERON:0002204,1.40e-19,167;UBERON:0002193,3.45e-19,108;UBERON:0003081,4.99e-13,203;UBERON:0002384,1.52e-11,371;UBERON:0000926,1.69e-11,315;UBERON:0004120,1.69e-11,315;UBERON:0006603,1.69e-11,315;UBERON:0007846,8.86e-08,3;UBERON:0000043,8.86e-08,3;UBERON:0007845,8.86e-08,3 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0,1.0007329835313,0,0,0,0.631719873426831,1.30592814099919,0.491467873003018,0,0,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.895661896959697,0.647787332037959,0.515151135268373,1.89017710413434,2.26725566213286,0.970336244751265,2.55671940596253,5.75635043230556,2.78735733805593,10.0692337312753,13.5765174460423,12.7700404139836,1.37898272294647,4.51839278508678,2.70852973188684,6.02375486536335,6.82265375144614,5.16864014223695,6.42776173978895,6.41858054152187,8.95071976118658,8.2462825046679,12.9651377454061,6.81959600852311,5.22376629531451,5.10646702222026,4.9825779919646,20.6023905510529,18.251902144707,9.55630916702513,4.23779651843358,5.89244217580104,3.48108626184973,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,0,1.44575660953827,0,0.869079113764942,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.930705723632056,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,1.72101972449288,0,0,0,0.24666754841716,0.933633106199299,0.134710672069688,0.980771418680752,0.302714855289863,0,0,0.936480230490962,0,1.79338416662161,0.23486899728753,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,1.34323515528495,1.18800285728205,0.989067717114227,0,0,0.336672227908132,0.500474079487857,0.277064115484183,0.438977620880838,0.612975591598039,1.20190447125277,0,0.179389635688862,0.640672166455702,0,0,0.309157587715317,0,0.744467425326359,0.675105328965065,0.0974370051611986,0.252433774244115,0.276149695926898,0.484938170456436,0.710019185033229,0,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.591534000199219,0.337169380156203,0.723033089650446,0.55146986366197,0,1.18635309555548,0.943819157121151,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,2.95460407304877,0.936017060556951,5.20209068010549,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,1.50171528921959,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.199945982364114,6.08118903205952,3.51579964002488,16.8667151586425,0,0,1.42636905040718,0.723906533337896,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,1.07057393278297,0.946214490203608,0.234282829985426,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0.561320188866147,0.128139149255701,0.511707249066704,0,0,1.07946785661859,1.24293207719189,0.410635780069046,0.519254429183621,2.20799719073923,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.910455840033585,0.786746489756545,0,0.231046011313244,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.308097234229289,1.07452572308291,0.137836572484531,0.107420244868274,0.290033387828457,0.681813019328807,0.267096106940212,0,0.384380134730212,0,0.4046311234222,0,0.31481234683064,0,0.616067160352178,0,0,0,0.429374660225974,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.471249609382746,0,0,1.26377536871694,0,0.974853958525138,1.05650146756755,0,0.565621727814851,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,0.563391205064483,0,0,0,0.354761064070598,1.05553817648832,0.658589785919804,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0.329607748453519,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0.394573622547734,0,0,0,0.556608588971108,0,0,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.569710279235006,0.46112780877612,0.179515288819544,0.434589487688032,0,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049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| ||
|short_description=p3@CTSL1 | |||
}} | }} |
Latest revision as of 03:40, 18 September 2015
Short description: | p3@CTSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSL1_5end |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | 0bp_to_AB463468, CR457053, DQ892930, DQ896179_5end |
EntrezGene: | CTSL1 |
HGNC: | 2537 |
UniProt: | P07711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.62e-51 | 48 |
phagocyte | 4.62e-51 | 48 |
classical monocyte | 3.49e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-42 | 42 |
monopoietic cell | 1.14e-38 | 59 |
monocyte | 1.14e-38 | 59 |
monoblast | 1.14e-38 | 59 |
promonocyte | 1.14e-38 | 59 |
macrophage dendritic cell progenitor | 4.48e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.65e-33 | 66 |
granulocyte monocyte progenitor cell | 7.37e-33 | 67 |
myeloid leukocyte | 6.99e-30 | 72 |
myeloid cell | 1.21e-16 | 108 |
common myeloid progenitor | 1.21e-16 | 108 |
nongranular leukocyte | 4.74e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.95e-14 | 120 |
mesenchymal cell | 6.71e-13 | 354 |
connective tissue cell | 2.52e-12 | 361 |
multi fate stem cell | 7.19e-12 | 427 |
somatic stem cell | 1.87e-11 | 433 |
leukocyte | 2.67e-11 | 136 |
motile cell | 6.29e-11 | 386 |
stem cell | 6.41e-11 | 441 |
macrophage | 2.39e-10 | 6 |
hematopoietic oligopotent progenitor cell | 3.40e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-08 | 161 |
fibrocyte | 8.86e-08 | 3 |
tendon cell | 8.86e-08 | 3 |
hematopoietic stem cell | 1.65e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-31 | 76 |
bone element | 1.39e-28 | 82 |
skeletal element | 4.17e-25 | 90 |
skeletal system | 2.68e-24 | 100 |
immune system | 5.87e-24 | 93 |
hematopoietic system | 3.34e-22 | 98 |
blood island | 3.34e-22 | 98 |
musculoskeletal system | 1.40e-19 | 167 |
hemolymphoid system | 3.45e-19 | 108 |
lateral plate mesoderm | 4.99e-13 | 203 |
connective tissue | 1.52e-11 | 371 |
mesoderm | 1.69e-11 | 315 |
mesoderm-derived structure | 1.69e-11 | 315 |
presumptive mesoderm | 1.69e-11 | 315 |
dense regular connective tissue | 8.86e-08 | 3 |
tendon | 8.86e-08 | 3 |
regular connective tissue | 8.86e-08 | 3 |