FFCP PHASE1:Hg19::chr2:171673417..171673422,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |EntrezGene=2571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |HGNC=4092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000344257_5end | |association_with_transcript=0bp_to_ENST00000344257_5end | ||
|cluster_id=chr2:171673417..171673422,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GAD1_5end | |description=CAGE_peak_6_at_GAD1_5end | ||
|id=chr2:171673417..171673422,+ | |id=chr2:171673417..171673422,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.33e-12;2!UBERON:0006601;8.88e-12;82 | |||
|ontology_enrichment_disease=DOID:305!1.23e-11!106;DOID:0050687!2.75e-09!143;DOID:162!6.38e-07!235 | |ontology_enrichment_disease=DOID:305!1.23e-11!106;DOID:0050687!2.75e-09!143;DOID:162!6.38e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.02e-64;32!UBERON:0002791;1.66e-60;32!UBERON:0001893;1.46e-57;34!UBERON:0003528;1.01e-53;34!UBERON:0002020;1.01e-53;34!UBERON:0002619;6.53e-53;22!UBERON:0001950;2.99e-51;20!UBERON:0002780;1.45e-46;41!UBERON:0001890;1.45e-46;41!UBERON:0000956;2.15e-46;25!UBERON:0000203;2.15e-46;25!UBERON:0000073;1.35e-28;53!UBERON:0002616;1.35e-28;53!UBERON:0000955;6.67e-28;68!UBERON:0001017;1.10e-26;75!UBERON:0000369;1.65e-21;4!UBERON:0002435;1.65e-21;4!UBERON:0000204;1.65e-21;4!UBERON:0001016;1.74e-20;83!UBERON:0002420;2.42e-20;9!UBERON:0007245;2.42e-20;9!UBERON:0010009;2.42e-20;9!UBERON:0010011;2.42e-20;9!UBERON:0000454;2.42e-20;9!UBERON:0009663;9.57e-19;7!UBERON:0001872;7.00e-17;5!UBERON:0005383;1.09e-16;3!UBERON:0005382;1.09e-16;3!UBERON:0002021;1.71e-16;5!UBERON:0000125;1.59e-14;9!UBERON:0002308;1.59e-14;9!UBERON:0000200;7.39e-14;6!UBERON:0001873;7.33e-12;2!UBERON:0001871;1.67e-11;6!UBERON:0000349;1.60e-09;5!UBERON:0007023;3.01e-09;114!UBERON:0011216;7.09e-09;132!UBERON:0001870;7.02e-08;3!UBERON:0002902;9.28e-07;1!UBERON:0002022;9.28e-07;1!UBERON:0009899;9.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.47e-70,32;UBERON:0001893,8.71e-66,34;UBERON:0002780,1.33e-64,41;UBERON:0001890,1.33e-64,41;UBERON:0003080,1.33e-64,41;UBERON:0006240,1.33e-64,41;UBERON:0002791,1.45e-63,32;UBERON:0003528,1.17e-59,34;UBERON:0002020,1.17e-59,34;UBERON:0000073,1.12e-53,53;UBERON:0002616,1.12e-53,53;UBERON:0002619,6.38e-53,22;UBERON:0001017,1.21e-52,81;UBERON:0000955,1.86e-51,68;UBERON:0006238,1.86e-51,68;UBERON:0001950,3.25e-51,20;UBERON:0001049,1.48e-50,56;UBERON:0005068,1.48e-50,56;UBERON:0006241,1.48e-50,56;UBERON:0007135,1.48e-50,56;UBERON:0001016,7.35e-47,89;UBERON:0000956,2.11e-46,25;UBERON:0000203,2.11e-46,25;UBERON:0003056,5.10e-42,61;UBERON:0003075,5.82e-33,82;UBERON:0007284,5.82e-33,82;UBERON:0002346,3.46e-31,86;UBERON:0010371,7.05e-25,104;UBERON:0007023,1.11e-24,114;UBERON:0004121,1.09e-21,171;UBERON:0000924,1.09e-21,171;UBERON:0006601,1.09e-21,171;UBERON:0000369,1.84e-21,4;UBERON:0002435,1.84e-21,4;UBERON:0000204,1.84e-21,4;UBERON:0010082,1.84e-21,4;UBERON:0011216,1.33e-20,223;UBERON:0002420,2.87e-20,9;UBERON:0007245,2.87e-20,9;UBERON:0010009,2.87e-20,9;UBERON:0010011,2.87e-20,9;UBERON:0000454,2.87e-20,9;UBERON:0010314,3.16e-20,132;UBERON:0009663,1.20e-18,7;UBERON:0001872,8.96e-17,5;UBERON:0005383,9.33e-17,3;UBERON:0005382,9.33e-17,3;UBERON:0002021,1.58e-16,5;UBERON:0000125,1.88e-14,9;UBERON:0002308,1.88e-14,9;UBERON:0000200,5.49e-14,6;UBERON:0000025,4.10e-12,192;UBERON:0001873,8.17e-12,2;UBERON:0010122,8.17e-12,2;UBERON:0001871,1.38e-11,6;UBERON:0000349,1.65e-09,5;UBERON:0004111,1.40e-08,240;UBERON:0001870,7.79e-08,3;UBERON:0002902,9.30e-07,1;UBERON:0009899,9.30e-07,1 | |||
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|short_description=p6@GAD1 | |short_description=p6@GAD1 | ||
}} | }} |
Latest revision as of 03:36, 18 September 2015
Short description: | p6@GAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000344257_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data