FFCP PHASE1:Hg19::chr16:84328580..84328591,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:84328580..84328591,+
|short_description=p9@WFDC1
|description=CAGE_peak_9_at_WFDC1_5end
|association_with_transcript=2bp_to_DQ893365,DQ896682_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58189 | |EntrezGene=58189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15466 | |HGNC=15466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_DQ893365,DQ896682_5end | |||
|cluster_id=chr16:84328580..84328591,+ | |||
|coexpression_cluster_id=C3594 | |||
|description=CAGE_peak_9_at_WFDC1_5end | |||
|id=chr16:84328580..84328591,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.60e-08!10;CL:0000541!3.60e-08!10;CL:0000147!9.80e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.63e-27;10!CL:0000147;2.94e-19;14!CL:0002567;1.60e-17;3!CL:0000710;3.28e-13;20!CL:0000075;1.50e-09;27!CL:0002566;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.32e-27,10;CL:0000541,2.32e-27,10;CL:0000147,2.69e-19,14;CL:0002567,1.91e-17,3;CL:0000710,3.08e-13,20;CL:0000075,1.44e-09,27;CL:0002077,2.07e-07,34;CL:0000333,2.46e-07,41;CL:0002566,4.78e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.35e-07;1!UBERON:0000358;3.67e-07;1!UBERON:0005754;3.67e-07;1!UBERON:0003124;8.23e-07;1!UBERON:0004874;8.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-26!115;UBERON:0001737!6.71e-10!9;UBERON:0005743!2.90e-08!86;UBERON:0000955!4.97e-08!69;UBERON:0006238!4.97e-08!69;UBERON:0002616!5.27e-08!59;UBERON:0001049!1.17e-07!57;UBERON:0005068!1.17e-07!57;UBERON:0006241!1.17e-07!57;UBERON:0007135!1.17e-07!57;UBERON:0001017!1.59e-07!82;UBERON:0000062!2.95e-07!511;UBERON:0003075!4.18e-07!86;UBERON:0007284!4.18e-07!86;UBERON:0000073!9.21e-07!94;UBERON:0001016!9.21e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.72e-08;3!UBERON:0004054;1.72e-08;3!UBERON:0000998;3.67e-07;1!UBERON:0006868;3.67e-07;1!UBERON:0001000;8.23e-07;1!UBERON:0000989;8.23e-07;1!UBERON:0008811;8.23e-07;1!UBERON:0005352;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.16e-08,3;UBERON:0004054,2.16e-08,3;UBERON:0000998,3.57e-07,1;UBERON:0006868,3.57e-07,1;UBERON:0000989,4.51e-07,1;UBERON:0008811,4.51e-07,1;UBERON:0006258,4.51e-07,1;UBERON:0005876,4.51e-07,1;UBERON:0004874,4.51e-07,1 | |||
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| ||
|short_description=p9@WFDC1 | |||
}} | }} |
Latest revision as of 03:36, 18 September 2015
Short description: | p9@WFDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_WFDC1_5end |
Coexpression cluster: | C3594_gall_Melanocyte_normal_smooth_Fibroblast_bladder_umbilical |
Association with transcript: | 2bp_to_DQ893365, DQ896682_5end |
EntrezGene: | WFDC1 |
HGNC: | 15466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.32e-27 | 10 |
melanoblast | 2.32e-27 | 10 |
pigment cell | 2.69e-19 | 14 |
light melanocyte | 1.91e-17 | 3 |
neurecto-epithelial cell | 3.08e-13 | 20 |
columnar/cuboidal epithelial cell | 1.44e-09 | 27 |
ecto-epithelial cell | 2.07e-07 | 34 |
migratory neural crest cell | 2.46e-07 | 41 |
dark melanocyte | 4.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.16e-08 | 3 |
internal male genitalia | 2.16e-08 | 3 |
seminal vesicle | 3.57e-07 | 1 |
seminal fluid secreting gland | 3.57e-07 | 1 |
penis | 4.51e-07 | 1 |
intromittent organ | 4.51e-07 | 1 |
lateral plate mesenchyme | 4.51e-07 | 1 |
undifferentiated genital tubercle | 4.51e-07 | 1 |
somatopleure | 4.51e-07 | 1 |