FFCP PHASE1:Hg19::chr10:38299546..38299686,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:38299546..38299686,+
|short_description=p1@ZNF33A
|description=CAGE_peak_1_at_ZNF33A_5end
|association_with_transcript=0bp_to_ENST00000277672,ENST00000374...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7581 | |EntrezGene=7581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13096 | |HGNC=13096 | ||
|UniProt=Q9H5I4, | |TSSclassifier=strong | ||
|UniProt=Q9H5I4,F8WAJ5,F6TH33,Q06730 | |||
|association_with_transcript=0bp_to_ENST00000277672,ENST00000374618,ENST00000432900,ENST00000458705,ENST00000469037,ENST00000476504,ENST00000478556,NM_006954,NM_006974,uc001izg.2,uc001izh.2,uc001izi.1,uc010qev.1_5end | |||
|cluster_id=chr10:38299546..38299686,+ | |||
|description=CAGE_peak_1_at_ZNF33A_5end | |||
|id=chr10:38299546..38299686,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.81e-14!53;CL:0000051!7.81e-14!53;CL:0000838!1.91e-13!52;CL:0000037!8.36e-10!172;CL:0000566!8.36e-10!172;CL:0000738!9.39e-10!140;CL:0002032!8.78e-09!165;CL:0000837!8.78e-09!165;CL:0000791!4.21e-08!18;CL:0000789!4.21e-08!18;CL:0002420!4.21e-08!18;CL:0002419!4.21e-08!18;CL:0000790!4.21e-08!18;CL:0000945!6.16e-08!24;CL:0000826!6.16e-08!24;CL:0000988!6.55e-08!182;CL:0000236!2.68e-07!14;CL:0002031!4.67e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.65e-08;53!CL:0000791;4.07e-08;18!CL:0000789;4.07e-08;18!CL:0002419;4.07e-08;18!CL:0000945;6.01e-08;24!CL:0000236;2.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.81e-14,53;CL:0000051,7.81e-14,53;CL:0000838,1.91e-13,52;CL:0000738,4.03e-10,136;CL:0000037,4.11e-10,168;CL:0002032,4.50e-09,161;CL:0000837,4.50e-09,161;CL:0000988,1.69e-08,177;CL:0000791,4.21e-08,18;CL:0000789,4.21e-08,18;CL:0002420,4.21e-08,18;CL:0002419,4.21e-08,18;CL:0000790,4.21e-08,18;CL:0000945,6.16e-08,24;CL:0000826,6.16e-08,24;CL:0002031,2.32e-07,120;CL:0000236,2.68e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-08;53!CL:0000790;4.07e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.75e-27!115;UBERON:0001017!6.31e-12!82;UBERON:0001049!9.52e-12!57;UBERON:0005068!9.52e-12!57;UBERON:0006241!9.52e-12!57;UBERON:0007135!9.52e-12!57;UBERON:0005743!1.72e-11!86;UBERON:0000073!5.97e-11!94;UBERON:0001016!5.97e-11!94;UBERON:0003080!7.49e-10!42;UBERON:0002780!1.41e-09!41;UBERON:0001890!1.41e-09!41;UBERON:0006240!1.41e-09!41;UBERON:0002616!9.04e-09!59;UBERON:0000955!1.70e-08!69;UBERON:0006238!1.70e-08!69;UBERON:0002020!1.29e-07!34;UBERON:0003528!1.29e-07!34;UBERON:0003075!4.33e-07!86;UBERON:0007284!4.33e-07!86;UBERON:0002346!7.50e-07!90;UBERON:0000178!7.88e-07!15;UBERON:0000179!7.88e-07!15;UBERON:0000463!7.88e-07!15;UBERON:0002791!9.20e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.44e-08;114!UBERON:0002780;2.87e-07;41!UBERON:0001890;2.87e-07;41!UBERON:0000178;9.48e-07;15!UBERON:0000179;9.48e-07;15!UBERON:0000463;9.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.41e-27,114;UBERON:0001017,1.16e-11,81;UBERON:0001049,1.80e-11,56;UBERON:0005068,1.80e-11,56;UBERON:0006241,1.80e-11,56;UBERON:0007135,1.80e-11,56;UBERON:0001016,4.58e-11,89;UBERON:0000073,2.01e-10,53;UBERON:0002616,2.01e-10,53;UBERON:0011216,6.99e-10,223;UBERON:0002780,1.41e-09,41;UBERON:0001890,1.41e-09,41;UBERON:0003080,1.41e-09,41;UBERON:0006240,1.41e-09,41;UBERON:0000955,2.97e-08,68;UBERON:0006238,2.97e-08,68;UBERON:0003528,1.29e-07,34;UBERON:0002020,1.29e-07,34;UBERON:0003075,5.21e-07,82;UBERON:0007284,5.21e-07,82;UBERON:0002791,7.59e-07,32;UBERON:0000178,7.88e-07,15;UBERON:0000179,7.88e-07,15;UBERON:0000463,7.88e-07,15;UBERON:0002346,9.20e-07,86 | |||
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| ||
|short_description=p1@ZNF33A | |||
}} | }} |
Latest revision as of 03:35, 18 September 2015
Short description: | p1@ZNF33A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF33A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000277672, ENST00000374618, ENST00000432900, ENST00000458705, ENST00000469037, ENST00000476504, ENST00000478556, NM_006954, NM_006974, uc001izg.2, uc001izh.2, uc001izi.1, uc010qev.1_5end |
EntrezGene: | ZNF33A |
HGNC: | 13096 |
UniProt: | Q9H5I4F8WAJ5F6TH33Q06730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.81e-14 | 53 |
common lymphoid progenitor | 7.81e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.91e-13 | 52 |
leukocyte | 4.03e-10 | 136 |
hematopoietic stem cell | 4.11e-10 | 168 |
hematopoietic oligopotent progenitor cell | 4.50e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.50e-09 | 161 |
hematopoietic cell | 1.69e-08 | 177 |
mature alpha-beta T cell | 4.21e-08 | 18 |
alpha-beta T cell | 4.21e-08 | 18 |
immature T cell | 4.21e-08 | 18 |
mature T cell | 4.21e-08 | 18 |
immature alpha-beta T cell | 4.21e-08 | 18 |
lymphocyte of B lineage | 6.16e-08 | 24 |
pro-B cell | 6.16e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 2.32e-07 | 120 |
B cell | 2.68e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.41e-27 | 114 |
central nervous system | 1.16e-11 | 81 |
neural tube | 1.80e-11 | 56 |
neural rod | 1.80e-11 | 56 |
future spinal cord | 1.80e-11 | 56 |
neural keel | 1.80e-11 | 56 |
nervous system | 4.58e-11 | 89 |
regional part of nervous system | 2.01e-10 | 53 |
regional part of brain | 2.01e-10 | 53 |
organ system subdivision | 6.99e-10 | 223 |
regional part of forebrain | 1.41e-09 | 41 |
forebrain | 1.41e-09 | 41 |
anterior neural tube | 1.41e-09 | 41 |
future forebrain | 1.41e-09 | 41 |
brain | 2.97e-08 | 68 |
future brain | 2.97e-08 | 68 |
brain grey matter | 1.29e-07 | 34 |
gray matter | 1.29e-07 | 34 |
neural plate | 5.21e-07 | 82 |
presumptive neural plate | 5.21e-07 | 82 |
regional part of telencephalon | 7.59e-07 | 32 |
blood | 7.88e-07 | 15 |
haemolymphatic fluid | 7.88e-07 | 15 |
organism substance | 7.88e-07 | 15 |
neurectoderm | 9.20e-07 | 86 |