FFCP PHASE1:Hg19::chr21:34143999..34144016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94104 | |EntrezGene=94104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13579 | |HGNC=13579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000443785_5end | |association_with_transcript=-1bp_to_ENST00000443785_5end | ||
|cluster_id=chr21:34143999..34144016,- | |||
|description=CAGE_peak_4_at_GCFC1_5end | |description=CAGE_peak_4_at_GCFC1_5end | ||
|id=chr21:34143999..34144016,- | |id=chr21:34143999..34144016,- | ||
|ontology_enrichment_celltype=CL:0000037!3.22e-21!172;CL:0000566!3.22e-21!172;CL:0000738!3.81e-21!140;CL:0002087!3.99e-20!119;CL:0000988!7.83e-19!182;CL:0002032!1.53e-18!165;CL:0000837!1.53e-18!165;CL:0002031!1.42e-17!124;CL:0002057!7.19e-17!42;CL:0000860!8.14e-17!45;CL:0000557!6.50e-13!71;CL:0002194!8.91e-13!63;CL:0000576!8.91e-13!63;CL:0000040!8.91e-13!63;CL:0000559!8.91e-13!63;CL:0000766!1.68e-12!76;CL:0002009!1.83e-12!65;CL:0000839!6.94e-12!70;CL:0000763!9.11e-12!112;CL:0000049!9.11e-12!112;CL:0000542!5.30e-07!53;CL:0000051!5.30e-07!53 | |ontology_enrichment_celltype=CL:0000037!3.22e-21!172;CL:0000566!3.22e-21!172;CL:0000738!3.81e-21!140;CL:0002087!3.99e-20!119;CL:0000988!7.83e-19!182;CL:0002032!1.53e-18!165;CL:0000837!1.53e-18!165;CL:0002031!1.42e-17!124;CL:0002057!7.19e-17!42;CL:0000860!8.14e-17!45;CL:0000557!6.50e-13!71;CL:0002194!8.91e-13!63;CL:0000576!8.91e-13!63;CL:0000040!8.91e-13!63;CL:0000559!8.91e-13!63;CL:0000766!1.68e-12!76;CL:0002009!1.83e-12!65;CL:0000839!6.94e-12!70;CL:0000763!9.11e-12!112;CL:0000049!9.11e-12!112;CL:0000542!5.30e-07!53;CL:0000051!5.30e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-16;33!CL:0002057;2.18e-16;33!CL:0000576;2.18e-12;48!CL:0000473;4.31e-10;39!CL:0000234;4.31e-10;39!CL:0000766;1.39e-07;69!CL:0002087;2.43e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.06e-21,168;CL:0000860,8.57e-21,42;CL:0002057,8.57e-21,42;CL:0000738,1.79e-20,136;CL:0002087,3.21e-20,115;CL:0000988,5.00e-20,177;CL:0002032,1.27e-17,161;CL:0000837,1.27e-17,161;CL:0002031,4.55e-17,120;CL:0000473,3.31e-16,48;CL:0000234,3.31e-16,48;CL:0002009,1.95e-15,61;CL:0002194,2.01e-15,59;CL:0000576,2.01e-15,59;CL:0000040,2.01e-15,59;CL:0000559,2.01e-15,59;CL:0000557,2.78e-15,67;CL:0000766,1.81e-14,72;CL:0000839,1.33e-13,66;CL:0000763,7.53e-13,108;CL:0000049,7.53e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.30e-13!86;UBERON:0002371!1.20e-11!80;UBERON:0002390!7.26e-11!102;UBERON:0003061!7.26e-11!102;UBERON:0004765!2.46e-10!101;UBERON:0001434!2.46e-10!101;UBERON:0002193!1.67e-09!112;UBERON:0002405!3.82e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.70e-15,82;UBERON:0002371,2.51e-13,76;UBERON:0002390,4.11e-13,98;UBERON:0003061,4.11e-13,98;UBERON:0004765,1.20e-12,90;UBERON:0002193,2.03e-11,108;UBERON:0002405,1.55e-10,93;UBERON:0001434,1.40e-09,100 | |||
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| ||
|short_description=p4@GCFC1 | |short_description=p4@GCFC1 | ||
}} | }} |
Latest revision as of 03:35, 18 September 2015
Short description: | p4@GCFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GCFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000443785_5end |
EntrezGene: | GCFC1 |
HGNC: | 13579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.06e-21 | 168 |
classical monocyte | 8.57e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.57e-21 | 42 |
leukocyte | 1.79e-20 | 136 |
nongranular leukocyte | 3.21e-20 | 115 |
hematopoietic cell | 5.00e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 4.55e-17 | 120 |
defensive cell | 3.31e-16 | 48 |
phagocyte | 3.31e-16 | 48 |
macrophage dendritic cell progenitor | 1.95e-15 | 61 |
monopoietic cell | 2.01e-15 | 59 |
monocyte | 2.01e-15 | 59 |
monoblast | 2.01e-15 | 59 |
promonocyte | 2.01e-15 | 59 |
granulocyte monocyte progenitor cell | 2.78e-15 | 67 |
myeloid leukocyte | 1.81e-14 | 72 |
myeloid lineage restricted progenitor cell | 1.33e-13 | 66 |
myeloid cell | 7.53e-13 | 108 |
common myeloid progenitor | 7.53e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.70e-15 | 82 |
bone marrow | 2.51e-13 | 76 |
hematopoietic system | 4.11e-13 | 98 |
blood island | 4.11e-13 | 98 |
skeletal element | 1.20e-12 | 90 |
hemolymphoid system | 2.03e-11 | 108 |
immune system | 1.55e-10 | 93 |
skeletal system | 1.40e-09 | 100 |