FFCP PHASE2:Hg19::chr2:171673216..171673225,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2571 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4092 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4092 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IVA8,Q99259 | ||
|association_with_transcript=16bp_to_ENST00000375272,NM_000817,NM_013445,uc002ugh.2,uc002ugi.2_5end | |association_with_transcript=16bp_to_ENST00000375272,NM_000817,NM_013445,uc002ugh.2,uc002ugi.2_5end | ||
|cluster_id=chr2:171673216..171673225,+ | |cluster_id=chr2:171673216..171673225,+ |
Latest revision as of 03:33, 18 September 2015
Short description: | p11@GAD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 16bp_to_ENST00000375272, NM_000817, NM_013445, uc002ugh.2, uc002ugi.2_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | Q8IVA8Q99259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@GAD1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 5.42e-58 | 32 |
telencephalon | 1.35e-54 | 34 |
regional part of forebrain | 1.08e-52 | 41 |
forebrain | 1.08e-52 | 41 |
anterior neural tube | 1.08e-52 | 41 |
future forebrain | 1.08e-52 | 41 |
regional part of telencephalon | 2.78e-49 | 32 |
regional part of nervous system | 7.52e-47 | 53 |
regional part of brain | 7.52e-47 | 53 |
brain grey matter | 2.18e-46 | 34 |
Showing 1 to 10 of 68 entries