FFCP PHASE1:Hg19::chr3:39093481..39093520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57599 | |EntrezGene=57599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30914 | |HGNC=30914 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAF3,F8W7Y5,C9JQ19,F8W9K4,F8W7Q3,F8W6P2 | |UniProt=Q8TAF3,F8W7Y5,C9JQ19,F8W9K4,F8W7Q3,F8W6P2 | ||
|association_with_transcript=0bp_to_ENST00000302313,ENST00000396258,ENST00000413099,ENST00000418020,ENST00000420940,ENST00000423296,ENST00000433841,ENST00000544962,NM_020839,uc003cit.2,uc003ciu.2,uc011ayt.1,uc011ayu.1,uc011ayv.1_5end | |association_with_transcript=0bp_to_ENST00000302313,ENST00000396258,ENST00000413099,ENST00000418020,ENST00000420940,ENST00000423296,ENST00000433841,ENST00000544962,NM_020839,uc003cit.2,uc003ciu.2,uc011ayt.1,uc011ayu.1,uc011ayv.1_5end | ||
|cluster_id=chr3:39093481..39093520,+ | |||
|coexpression_cluster_id=C1725 | |coexpression_cluster_id=C1725 | ||
|description=CAGE_peak_1_at_WDR48_5end | |description=CAGE_peak_1_at_WDR48_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.50e-24!140;CL:0000037!3.35e-21!172;CL:0000566!3.35e-21!172;CL:0000988!1.84e-19!182;CL:0002032!1.20e-18!165;CL:0000837!1.20e-18!165;CL:0002031!5.68e-18!124;CL:0002087!6.88e-16!119;CL:0000838!4.15e-11!52;CL:0002057!5.95e-11!42;CL:0000860!7.24e-11!45;CL:0000542!1.13e-10!53;CL:0000051!1.13e-10!53;CL:0000766!8.75e-10!76;CL:0000763!5.55e-09!112;CL:0000049!5.55e-09!112;CL:0000791!2.26e-08!18;CL:0000789!2.26e-08!18;CL:0002420!2.26e-08!18;CL:0002419!2.26e-08!18;CL:0000790!2.26e-08!18;CL:0000839!2.06e-07!70;CL:0000084!2.42e-07!25;CL:0000827!2.42e-07!25;CL:0000557!4.40e-07!71 | |ontology_enrichment_celltype=CL:0000738!1.50e-24!140;CL:0000037!3.35e-21!172;CL:0000566!3.35e-21!172;CL:0000988!1.84e-19!182;CL:0002032!1.20e-18!165;CL:0000837!1.20e-18!165;CL:0002031!5.68e-18!124;CL:0002087!6.88e-16!119;CL:0000838!4.15e-11!52;CL:0002057!5.95e-11!42;CL:0000860!7.24e-11!45;CL:0000542!1.13e-10!53;CL:0000051!1.13e-10!53;CL:0000766!8.75e-10!76;CL:0000763!5.55e-09!112;CL:0000049!5.55e-09!112;CL:0000791!2.26e-08!18;CL:0000789!2.26e-08!18;CL:0002420!2.26e-08!18;CL:0002419!2.26e-08!18;CL:0000790!2.26e-08!18;CL:0000839!2.06e-07!70;CL:0000084!2.42e-07!25;CL:0000827!2.42e-07!25;CL:0000557!4.40e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.27e-08;18!CL:0000789;2.27e-08;18!CL:0002419;2.27e-08;18!CL:0000860;2.17e-07;33!CL:0002057;2.17e-07;33!CL:0000084;2.43e-07;25!CL:0000542;3.46e-07;53!CL:0002087;7.39e-07;104 | |ontology_enrichment_celltype_v019=CL:0000791;2.27e-08;18!CL:0000789;2.27e-08;18!CL:0002419;2.27e-08;18!CL:0000860;2.17e-07;33!CL:0002057;2.17e-07;33!CL:0000084;2.43e-07;25!CL:0000542;3.46e-07;53!CL:0002087;7.39e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.74e-25,136;CL:0000037,1.90e-21,168;CL:0000988,2.84e-20,177;CL:0002032,7.15e-19,161;CL:0000837,7.15e-19,161;CL:0002031,2.59e-18,120;CL:0002087,3.38e-16,115;CL:0000838,4.15e-11,52;CL:0000860,5.95e-11,42;CL:0002057,5.95e-11,42;CL:0000542,1.13e-10,53;CL:0000051,1.13e-10,53;CL:0000766,4.33e-10,72;CL:0000763,3.89e-09,108;CL:0000049,3.89e-09,108;CL:0000791,2.26e-08,18;CL:0000789,2.26e-08,18;CL:0002420,2.26e-08,18;CL:0002419,2.26e-08,18;CL:0000790,2.26e-08,18;CL:0000473,6.15e-08,48;CL:0000234,6.15e-08,48;CL:0000839,1.21e-07,66;CL:0000084,2.42e-07,25;CL:0000827,2.42e-07,25;CL:0000557,2.71e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;2.27e-08;18!CL:0002057;4.68e-08;42!CL:0000051;3.46e-07;53 | |ontology_enrichment_development_v019=CL:0000790;2.27e-08;18!CL:0002057;4.68e-08;42!CL:0000051;3.46e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.92e-14!115;UBERON:0001017!4.81e-13!82;UBERON:0002780!5.39e-13!41;UBERON:0001890!5.39e-13!41;UBERON:0006240!5.39e-13!41;UBERON:0005743!9.29e-13!86;UBERON:0001049!1.55e-12!57;UBERON:0005068!1.55e-12!57;UBERON:0006241!1.55e-12!57;UBERON:0007135!1.55e-12!57;UBERON:0003080!1.71e-12!42;UBERON:0000073!3.58e-11!94;UBERON:0001016!3.58e-11!94;UBERON:0001893!4.23e-11!34;UBERON:0002616!8.60e-11!59;UBERON:0002020!9.95e-11!34;UBERON:0003528!9.95e-11!34;UBERON:0002791!1.07e-10!33;UBERON:0002390!1.19e-10!102;UBERON:0003061!1.19e-10!102;UBERON:0001869!1.81e-10!32;UBERON:0000955!3.95e-10!69;UBERON:0006238!3.95e-10!69;UBERON:0002193!1.75e-09!112;UBERON:0002619!3.04e-08!22;UBERON:0000956!5.78e-08!25;UBERON:0000203!5.78e-08!25;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15;UBERON:0001950!1.69e-07!20;UBERON:0003056!3.94e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!6.92e-14!115;UBERON:0001017!4.81e-13!82;UBERON:0002780!5.39e-13!41;UBERON:0001890!5.39e-13!41;UBERON:0006240!5.39e-13!41;UBERON:0005743!9.29e-13!86;UBERON:0001049!1.55e-12!57;UBERON:0005068!1.55e-12!57;UBERON:0006241!1.55e-12!57;UBERON:0007135!1.55e-12!57;UBERON:0003080!1.71e-12!42;UBERON:0000073!3.58e-11!94;UBERON:0001016!3.58e-11!94;UBERON:0001893!4.23e-11!34;UBERON:0002616!8.60e-11!59;UBERON:0002020!9.95e-11!34;UBERON:0003528!9.95e-11!34;UBERON:0002791!1.07e-10!33;UBERON:0002390!1.19e-10!102;UBERON:0003061!1.19e-10!102;UBERON:0001869!1.81e-10!32;UBERON:0000955!3.95e-10!69;UBERON:0006238!3.95e-10!69;UBERON:0002193!1.75e-09!112;UBERON:0002619!3.04e-08!22;UBERON:0000956!5.78e-08!25;UBERON:0000203!5.78e-08!25;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15;UBERON:0001950!1.69e-07!20;UBERON:0003056!3.94e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.08e-09;41!UBERON:0001890;1.08e-09;41!UBERON:0001893;1.21e-09;34!UBERON:0002791;1.30e-09;32!UBERON:0001869;1.43e-09;32!UBERON:0003528;1.89e-09;34!UBERON:0002020;1.89e-09;34!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0002619;2.99e-08;22!UBERON:0000956;5.40e-08;25!UBERON:0000203;5.40e-08;25!UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15!UBERON:0001950;1.65e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.08e-09;41!UBERON:0001890;1.08e-09;41!UBERON:0001893;1.21e-09;34!UBERON:0002791;1.30e-09;32!UBERON:0001869;1.43e-09;32!UBERON:0003528;1.89e-09;34!UBERON:0002020;1.89e-09;34!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0002619;2.99e-08;22!UBERON:0000956;5.40e-08;25!UBERON:0000203;5.40e-08;25!UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15!UBERON:0001950;1.65e-07;20 | ||
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| ||
|short_description=p1@WDR48 | |short_description=p1@WDR48 | ||
}} | }} |
Latest revision as of 03:29, 18 September 2015
Short description: | p1@WDR48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR48_5end |
Coexpression cluster: | C1725_Neutrophils_Eosinophils_Mast_CD8_Natural_CD4_cord |
Association with transcript: | 0bp_to_ENST00000302313, ENST00000396258, ENST00000413099, ENST00000418020, ENST00000420940, ENST00000423296, ENST00000433841, ENST00000544962, NM_020839, uc003cit.2, uc003ciu.2, uc011ayt.1, uc011ayu.1, uc011ayv.1_5end |
EntrezGene: | WDR48 |
HGNC: | 30914 |
UniProt: | Q8TAF3F8W7Y5C9JQ19F8W9K4F8W7Q3F8W6P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.74e-25 | 136 |
hematopoietic stem cell | 1.90e-21 | 168 |
hematopoietic cell | 2.84e-20 | 177 |
hematopoietic oligopotent progenitor cell | 7.15e-19 | 161 |
hematopoietic multipotent progenitor cell | 7.15e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 2.59e-18 | 120 |
nongranular leukocyte | 3.38e-16 | 115 |
lymphoid lineage restricted progenitor cell | 4.15e-11 | 52 |
classical monocyte | 5.95e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.95e-11 | 42 |
lymphocyte | 1.13e-10 | 53 |
common lymphoid progenitor | 1.13e-10 | 53 |
myeloid leukocyte | 4.33e-10 | 72 |
myeloid cell | 3.89e-09 | 108 |
common myeloid progenitor | 3.89e-09 | 108 |
mature alpha-beta T cell | 2.26e-08 | 18 |
alpha-beta T cell | 2.26e-08 | 18 |
immature T cell | 2.26e-08 | 18 |
mature T cell | 2.26e-08 | 18 |
immature alpha-beta T cell | 2.26e-08 | 18 |
defensive cell | 6.15e-08 | 48 |
phagocyte | 6.15e-08 | 48 |
myeloid lineage restricted progenitor cell | 1.21e-07 | 66 |
T cell | 2.42e-07 | 25 |
pro-T cell | 2.42e-07 | 25 |
granulocyte monocyte progenitor cell | 2.71e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.60e-13 | 114 |
central nervous system | 2.33e-13 | 81 |
regional part of forebrain | 5.39e-13 | 41 |
forebrain | 5.39e-13 | 41 |
anterior neural tube | 5.39e-13 | 41 |
future forebrain | 5.39e-13 | 41 |
neural tube | 6.17e-13 | 56 |
neural rod | 6.17e-13 | 56 |
future spinal cord | 6.17e-13 | 56 |
neural keel | 6.17e-13 | 56 |
regional part of nervous system | 1.16e-12 | 53 |
regional part of brain | 1.16e-12 | 53 |
nervous system | 1.24e-11 | 89 |
telencephalon | 4.23e-11 | 34 |
hematopoietic system | 7.04e-11 | 98 |
blood island | 7.04e-11 | 98 |
brain grey matter | 9.95e-11 | 34 |
gray matter | 9.95e-11 | 34 |
cerebral hemisphere | 1.81e-10 | 32 |
regional part of telencephalon | 1.95e-10 | 32 |
brain | 2.02e-10 | 68 |
future brain | 2.02e-10 | 68 |
hemolymphoid system | 1.19e-09 | 108 |
regional part of cerebral cortex | 3.04e-08 | 22 |
cerebral cortex | 5.78e-08 | 25 |
pallium | 5.78e-08 | 25 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |
neocortex | 1.69e-07 | 20 |
neurectoderm | 5.16e-07 | 86 |
pre-chordal neural plate | 5.85e-07 | 61 |
neural plate | 6.52e-07 | 82 |
presumptive neural plate | 6.52e-07 | 82 |