FFCP PHASE1:Hg19::chr2:69002354..69002366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9938 | |EntrezGene=9938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28951 | |HGNC=28951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=318bp_to_uc010fdh.1_5end | |||
|cluster_id=chr2:69002354..69002366,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_16_at_ARHGAP25_5end | |||
|id=chr2:69002354..69002366,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.13e-45!76;CL:0002057!1.31e-39!42;CL:0000738!6.58e-38!140;CL:0000557!1.10e-36!71;CL:0000860!2.41e-36!45;CL:0000839!4.64e-35!70;CL:0002009!6.30e-34!65;CL:0002194!5.54e-33!63;CL:0000576!5.54e-33!63;CL:0000040!5.54e-33!63;CL:0000559!5.54e-33!63;CL:0000763!3.77e-28!112;CL:0000049!3.77e-28!112;CL:0000037!7.12e-28!172;CL:0000566!7.12e-28!172;CL:0000988!9.01e-28!182;CL:0002031!1.37e-27!124;CL:0002087!2.37e-27!119;CL:0002032!6.06e-26!165;CL:0000837!6.06e-26!165;CL:0000094!1.69e-10!8;CL:0000775!2.25e-08!3;CL:0002393!6.47e-08!9;CL:0002397!6.47e-08!9;CL:0000081!2.24e-07!11;CL:0000875!2.93e-07!3;CL:0002396!2.93e-07!3;CL:0000134!9.93e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.62e-24;8!CL:0000775;2.44e-24;3!CL:0000081;8.33e-18;11!CL:0000771;1.00e-16;2!CL:0000860;7.72e-13;33!CL:0002057;7.72e-13;33!CL:0000766;2.17e-10;69!CL:0000473;2.70e-10;39!CL:0000234;2.70e-10;39!CL:0000097;2.97e-07;5!CL:0000576;3.43e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.33e-24,8;CL:0000775,1.78e-24,3;CL:0000766,8.50e-24,72;CL:0000081,7.25e-18,11;CL:0000763,4.33e-17,108;CL:0000049,4.33e-17,108;CL:0000771,1.00e-16,2;CL:0000557,8.10e-14,67;CL:0000738,5.86e-13,136;CL:0000839,1.01e-11,66;CL:0000473,2.98e-11,48;CL:0000234,2.98e-11,48;CL:0002032,1.78e-10,161;CL:0000837,1.78e-10,161;CL:0002009,1.94e-10,61;CL:0000860,2.71e-10,42;CL:0002057,2.71e-10,42;CL:0000037,6.53e-10,168;CL:0000988,2.98e-09,177;CL:0002194,9.67e-09,59;CL:0000576,9.67e-09,59;CL:0000040,9.67e-09,59;CL:0000559,9.67e-09,59;CL:0000097,3.25e-07,5;CL:0002028,3.25e-07,5;CL:0002031,7.23e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.30e-52!102;UBERON:0003061!5.30e-52!102;UBERON:0002193!7.70e-50!112;UBERON:0002371!2.72e-31!80;UBERON:0001474!2.52e-28!86;UBERON:0002405!3.85e-26!115;UBERON:0003081!3.56e-23!216;UBERON:0004765!1.81e-22!101;UBERON:0001434!1.81e-22!101;UBERON:0000178!3.06e-20!15;UBERON:0000179!3.06e-20!15;UBERON:0000463!3.06e-20!15;UBERON:0002204!7.40e-11!167;UBERON:0000926!1.05e-07!448;UBERON:0004120!1.05e-07!448;UBERON:0006603!1.05e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.36e-41;15!UBERON:0000179;5.36e-41;15!UBERON:0000463;5.36e-41;15!UBERON:0002390;5.26e-17;32!UBERON:0002193;1.65e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.37e-41,15;UBERON:0000179,5.37e-41,15;UBERON:0000463,5.37e-41,15;UBERON:0002390,1.95e-30,98;UBERON:0003061,1.95e-30,98;UBERON:0002193,2.59e-27,108;UBERON:0003081,7.18e-13,203;UBERON:0002371,5.82e-12,76;UBERON:0001474,6.01e-11,82;UBERON:0004765,8.36e-10,90;UBERON:0002405,2.00e-09,93;UBERON:0001434,1.25e-08,100;UBERON:0000926,5.90e-07,315;UBERON:0004120,5.90e-07,315;UBERON:0006603,5.90e-07,315 | |||
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| ||
|short_description=p16@ARHGAP25 | |||
}} | }} |
Latest revision as of 03:12, 18 September 2015
Short description: | p16@ARHGAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ARHGAP25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 318bp_to_uc010fdh.1_5end |
EntrezGene: | ARHGAP25 |
HGNC: | 28951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.33e-24 | 8 |
neutrophil | 1.78e-24 | 3 |
myeloid leukocyte | 8.50e-24 | 72 |
blood cell | 7.25e-18 | 11 |
myeloid cell | 4.33e-17 | 108 |
common myeloid progenitor | 4.33e-17 | 108 |
eosinophil | 1.00e-16 | 2 |
granulocyte monocyte progenitor cell | 8.10e-14 | 67 |
leukocyte | 5.86e-13 | 136 |
myeloid lineage restricted progenitor cell | 1.01e-11 | 66 |
defensive cell | 2.98e-11 | 48 |
phagocyte | 2.98e-11 | 48 |
hematopoietic oligopotent progenitor cell | 1.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-10 | 161 |
macrophage dendritic cell progenitor | 1.94e-10 | 61 |
classical monocyte | 2.71e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-10 | 42 |
hematopoietic stem cell | 6.53e-10 | 168 |
hematopoietic cell | 2.98e-09 | 177 |
monopoietic cell | 9.67e-09 | 59 |
monocyte | 9.67e-09 | 59 |
monoblast | 9.67e-09 | 59 |
promonocyte | 9.67e-09 | 59 |
mast cell | 3.25e-07 | 5 |
basophil mast progenitor cell | 3.25e-07 | 5 |
hematopoietic lineage restricted progenitor cell | 7.23e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.37e-41 | 15 |
haemolymphatic fluid | 5.37e-41 | 15 |
organism substance | 5.37e-41 | 15 |
hematopoietic system | 1.95e-30 | 98 |
blood island | 1.95e-30 | 98 |
hemolymphoid system | 2.59e-27 | 108 |
lateral plate mesoderm | 7.18e-13 | 203 |
bone marrow | 5.82e-12 | 76 |
bone element | 6.01e-11 | 82 |
skeletal element | 8.36e-10 | 90 |
immune system | 2.00e-09 | 93 |
skeletal system | 1.25e-08 | 100 |
mesoderm | 5.90e-07 | 315 |
mesoderm-derived structure | 5.90e-07 | 315 |
presumptive mesoderm | 5.90e-07 | 315 |