FFCP PHASE1:Hg19::chr6:32490039..32490046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3127 | |EntrezGene=3127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4953 | |HGNC=4953 | ||
|TSSclassifier=strong | |||
|UniProt=Q29972 | |UniProt=Q29972 | ||
|association_with_transcript=-88bp_to_AF097680,M15992_5end | |association_with_transcript=-88bp_to_AF097680,M15992_5end | ||
|cluster_id=chr6:32490039..32490046,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_13_at_HLA-DRB5_5end | |description=CAGE_peak_13_at_HLA-DRB5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001874!4.10e-23!1;UBERON:0000473!3.74e-12!8;UBERON:0000991!3.46e-10!21;UBERON:0009196!3.46e-10!21;UBERON:0009117!3.46e-10!21;UBERON:0005564!3.46e-10!21;UBERON:0004176!9.40e-10!22;UBERON:0003135!4.25e-09!11;UBERON:0005383!1.30e-08!3;UBERON:0005382!1.30e-08!3;UBERON:0001896!1.40e-08!3;UBERON:0005290!1.40e-08!3;UBERON:0010096!1.40e-08!3;UBERON:0000369!9.11e-07!4;UBERON:0002435!9.11e-07!4;UBERON:0000204!9.11e-07!4;UBERON:0010082!9.11e-07!4 | |ontology_enrichment_uberon=UBERON:0001874!4.10e-23!1;UBERON:0000473!3.74e-12!8;UBERON:0000991!3.46e-10!21;UBERON:0009196!3.46e-10!21;UBERON:0009117!3.46e-10!21;UBERON:0005564!3.46e-10!21;UBERON:0004176!9.40e-10!22;UBERON:0003135!4.25e-09!11;UBERON:0005383!1.30e-08!3;UBERON:0005382!1.30e-08!3;UBERON:0001896!1.40e-08!3;UBERON:0005290!1.40e-08!3;UBERON:0010096!1.40e-08!3;UBERON:0000369!9.11e-07!4;UBERON:0002435!9.11e-07!4;UBERON:0000204!9.11e-07!4;UBERON:0010082!9.11e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |||
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|short_description=p13@HLA-DRB5 | |short_description=p13@HLA-DRB5 | ||
}} | }} |
Latest revision as of 03:10, 18 September 2015
Short description: | p13@HLA-DRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HLA-DRB5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -88bp_to_AF097680, M15992_5end |
EntrezGene: | HLA-DRB5 |
HGNC: | 4953 |
UniProt: | Q29972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |