FFCP PHASE1:Hg19::chr5:53606339..53606351,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:53606339..53606351,- to FFCP PHASE1:Hg19::chr5:53606339..53606351,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54622 | |EntrezGene=54622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25945 | |HGNC=25945 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXU5 | |UniProt=Q9NXU5 | ||
|association_with_transcript=51bp_to_ENST00000504924,ENST00000505383,NM_019087,uc003jpg.1,uc010ivs.1_5end | |||
|cluster_id=chr5:53606339..53606351,- | |||
|description=CAGE_peak_4_at_ARL15_5end | |||
|id=chr5:53606339..53606351,- | |||
|ontology_enrichment_celltype=CL:0002031!1.41e-07!124;CL:0000738!1.82e-07!140;CL:0000766!2.58e-07!76;CL:0002087!5.11e-07!119;CL:0000839!9.37e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.39e-09,72;CL:0000839,2.24e-07,66;CL:0000738,3.65e-07,136;CL:0000557,4.39e-07,67;CL:0002031,9.70e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.24e-07!112;UBERON:0002390!4.66e-07!102;UBERON:0003061!4.66e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.07e-08,108;UBERON:0002390,1.15e-07,98;UBERON:0003061,1.15e-07,98;UBERON:0002405,8.28e-07,93 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.563817616383885,2.00146596706261,2.23480547213644,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0.791300934685361,0.618831764800233,0.662794751455832,5.3786011716142,3.61616716814386,1.46062018077475,1.46379839637152,0.61560529038394,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0.125542639594803,1.06978768047132,0.57470412614962,0.944529375764151,1.57345710739562,1.91914699048606,1.85779347979291,0.919421224478927,1.204823675113,0.739508020333575,0.697204805222715,0.426507697462265,0.587200878669695,1.66198622559563,1.60435557976113,1.08505435357926,1.11957737119962,2.26725566213286,1.28787783817093,1.89017710413434,0.755751887377619,1.4555043671269,1.85943229524548,0.411167888021826,0.929119112685311,0.863077176966451,1.2808035326455,0.945928919554341,0.689491361473237,1.93645405075148,1.35426486594342,1.12945403725563,1.63743690034707,1.34834090667051,1.22433556948361,1.92557416245656,0.639337125799041,0.989553900560148,0.598390972864896,0,2.03146467040009,1.13477044938228,1.24564449799115,1.00499466102697,0,1.73751075764093,0,0.368277635987565,1.26584954976354,2.5350634357433,1.4882300997553,1.25795187305026,2.3589012540764,1.65194582125657,2.4108838004562,0.285012743741249,1.59133341759272,1.46131323011707,0,1.09227722252426,0,1.70692089026603,0.400395987036012,0,0,1.90810750907073,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,1.68152568894461,1.31692042387539,1.57367816091066,1.96505381374582,1.23360899399706,2.67498392625085,1.30368906653436,1.89379122293893,1.94826728407911,3.11949279278486,2.3568472597987,3.54454231333794,3.5204502289452,3.0741916734162,2.08094956095805,2.63100647365882,3.03985019564433,1.44901542867526,1.63115219478266,1.07016331235885,0,2.83273356743915,2.68254345521345,2.40539211837841,3.28925599625354,0.95569624297229,2.60433381542567,1.90090408889675,2.40920190524436,3.32765189001488,1.24930726552346,1.4206635122641,0.821127996921047,2.01606743224732,1.87208137048455,1.88271725047639,0,0.670700859703636,0.383587685530591,0.361439152384566,1.00267582127178,0.144846518960824,2.3858578411533,0,0.756278537312543,1.77383517970051,0.614843499851882,1.24430121722827,0,0.370784442784429,4.21911611751088,2.78607579678828,2.79211717089617,0.238490624305342,0,0.74291500265913,0.39752481473341,0,0,1.69592382577203,0.419499436209906,0.825354125820202,0.626984899610432,0.775250277507987,2.49036383880697,1.00416183829401,2.01414658554573,0,0.488124115096339,1.10298924103761,2.43042584364528,0.535798369704479,0.22452937262617,0.563057402416611,0,0,0.549605231791222,0,0,0.872188104285069,1.49091585508596,0.379891534993739,3.04541115870403,1.72101972449288,1.41867352879343,1.12135520028461,0,0.24666754841716,0.933633106199299,1.88594940897563,1.79808093424805,0.454072282934794,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.587172493218824,1.13311061057692,1.26405726032024,1.02077085627447,0.368502951935304,0.413303124703062,2.37600571456411,0.494533858557114,0,0,0,0.500474079487857,1.10825646193673,0.438977620880838,0,0.150238058906597,0.453728732640084,1.07633781413317,0.427114777637135,0.635795703478686,0.600182192168805,1.64884046781502,1.54584324027377,0.37223371266318,0.506328996723799,1.07180705677318,0.504867548488229,0.736399189138395,2.90962902273861,0.355009592516614,0.806016785821122,0.67824236924195,1.35282597214308,1.09098448236334,1.14721838155602,0.121973706129595,0.662648841607426,0.69716365721711,0.829288440122964,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,1.26755034821831,2.94848165003288,0.590789906681404,0.882926198829301,1.96781501668982,0.171567810298526,2.30475599358114,0,0.502644862058154,1.29623823221941,0,0,2.88662684050547,0.463721619900307,0.70445216541493,0.288732895522148,1.38895653772983,2.28304982681518,0,0,3.93947209739836,2.34004265139238,4.01304138179566,0.93733833986777,1.17587489739202,1.13420077793909,1.25381931783988,1.74380363108377,0,7.8826118063351,4.4024217006613,2.69526550203004,2.88239906833923,1.76739406796932,0.825472625798197,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0.901029173531752,1.71495859578347,0.112131084345361,0.43596006883328,0,1.68053230485111,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,1.20575750823834,1.74306691720059,0.99972991182057,1.2162378064119,1.00451418286425,0,0,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0.448340575974109,2.36436912242313,1.94064817373566,1.92514554419623,0,2.60279707715243,0,1.50764638800914,0.637938751653163,0.749007023947182,2.99161459204025,2.07207756718018,0.613457458595699,0,0,1.03985430765404,1.24900292158013,0.630809660135739,0.702848489956279,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.955719759148911,0.19580115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| ||
|short_description=p4@ARL15 | |||
}} | }} |
Latest revision as of 03:06, 18 September 2015
Short description: | p4@ARL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARL15_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_ENST00000504924, ENST00000505383, NM_019087, uc003jpg.1, uc010ivs.1_5end |
EntrezGene: | ARL15 |
HGNC: | 25945 |
UniProt: | Q9NXU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.39e-09 | 72 |
myeloid lineage restricted progenitor cell | 2.24e-07 | 66 |
leukocyte | 3.65e-07 | 136 |
granulocyte monocyte progenitor cell | 4.39e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 9.70e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.07e-08 | 108 |
hematopoietic system | 1.15e-07 | 98 |
blood island | 1.15e-07 | 98 |
immune system | 8.28e-07 | 93 |