FFCP PHASE1:Hg19::chr8:38008461..38008477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6770 | |EntrezGene=6770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11359 | |HGNC=11359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000520114_5end | |association_with_transcript=32bp_to_ENST00000520114_5end | ||
|cluster_id=chr8:38008461..38008477,- | |||
|description=CAGE_peak_1_at_STAR_5end | |description=CAGE_peak_1_at_STAR_5end | ||
|id=chr8:38008461..38008477,- | |id=chr8:38008461..38008477,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002600;7.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,7.96e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.17e-07!31;DOID:2394!2.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.32e-15;14!DOID:193;2.62e-08;29!DOID:120;3.57e-07;27!DOID:1036;4.93e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.30e-15,14;DOID:193,2.60e-08,29;DOID:120,3.55e-07,27;DOID:1036,5.01e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002616!3.56e-12!59;UBERON:0001049!5.95e-12!57;UBERON:0005068!5.95e-12!57;UBERON:0006241!5.95e-12!57;UBERON:0007135!5.95e-12!57;UBERON:0002780!4.84e-11!41;UBERON:0001890!4.84e-11!41;UBERON:0006240!4.84e-11!41;UBERON:0007023!6.37e-11!115;UBERON:0001893!7.31e-11!34;UBERON:0003080!1.29e-10!42;UBERON:0002020!1.39e-10!34;UBERON:0003528!1.39e-10!34;UBERON:0000955!1.97e-10!69;UBERON:0006238!1.97e-10!69;UBERON:0002791!4.49e-10!33;UBERON:0000073!1.21e-09!94;UBERON:0001016!1.21e-09!94;UBERON:0000991!1.61e-09!21;UBERON:0009196!1.61e-09!21;UBERON:0009117!1.61e-09!21;UBERON:0005564!1.61e-09!21;UBERON:0001869!2.04e-09!32;UBERON:0001017!2.48e-09!82;UBERON:0005743!5.10e-09!86;UBERON:0004176!6.73e-09!22;UBERON:0003075!8.96e-09!86;UBERON:0007284!8.96e-09!86;UBERON:0002346!1.51e-08!90;UBERON:0000992!1.72e-08!13;UBERON:0002118!3.67e-08!5;UBERON:0004532!3.67e-08!5;UBERON:0001950!6.46e-08!20;UBERON:0003056!2.56e-07!61;UBERON:0000200!5.62e-07!6;UBERON:0002619!6.47e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;2.87e-22;21!UBERON:0000992;5.42e-21;13!UBERON:0002118;6.93e-18;5!UBERON:0002119;8.61e-09;4!UBERON:0002323;1.16e-07;45!UBERON:0004458;1.50e-07;48!UBERON:0003133;3.16e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.85e-22,21;UBERON:0009196,2.85e-22,21;UBERON:0009117,2.85e-22,21;UBERON:0005564,2.85e-22,21;UBERON:0004176,4.00e-21,22;UBERON:0000992,5.37e-21,13;UBERON:0002118,6.83e-18,5;UBERON:0002323,8.42e-12,46;UBERON:0003886,4.66e-11,54;UBERON:0004458,7.14e-11,49;UBERON:0003133,1.32e-09,48;UBERON:0002553,2.23e-09,61;UBERON:0002119,8.63e-09,4;UBERON:0005156,2.88e-07,59;UBERON:0000990,2.88e-07,59 | |||
|phase1_expression=0,3.21150785836475,0.140954404095971,0,1.78784437770915,0,5.06599756336621,0.631719873426831,2.08948502559871,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4624275105164,0.767175371061182,0,0,0,0,0,0,0,0,28.2259907697571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.933633106199299,0,1.30769522490767,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,1.13432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,5.88034845542168,0,0,147.10668676367,0,0,9.09309394582185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,0.714889968290738,23.3327290318321,2.46972101034231,0,0.710783897485092,1.58390374586686,0,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,0,0,0,0,157.470251247276,0,1.07834031980251,1.07452572308291,0,7.62683738564743,3.62541734785571,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,1.90630193923825,0,0,0,0,0.359744915166629,2.19629623788844,1.88499843753098,0,0,0,3.41343617362713,0,0,0,0.141405431953713,0,0,0,0,14.4693883566672,7.21484227251296,0,0,0,0.430234056612155,0,0,0.709522128141196,0,0,0.379473173765715,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.851692475380653,1.37402137902306,0,0.671028323677248,0.166849141711909,0.390776190804081,124.169153557278,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0.831058409500782,15.5661005825855,21.3708162406336,13.5935485450433,6.07211944717392,0.317873157960757,0,0,0,0,0,0,0.611030144933625,0,0,0,34.3071766871646,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.577901179803038,1.20084057741958,0,0,15.9013213325384,0,0,0,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,7.02891481008975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.904980694530854,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0.751145584238999,0,0.110929051536852,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0.378806010550178,0,0.889811221596536,0,0.151230923763239,0.310874401165561,0,56.7096491102781,24.7391711689983,105.578810675856,0,0,0,0.300515217994437,0,106.600132099621,53.2816571463499,22.9858592070925,23.6657217538032,17.1181232140405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0.786329709279482,0,0,0.212574920101683,0,0,0,0,0,0,0,29.6739019945643,0,0.319267718114302,0.82046545696302,0,0.829887029570615,0.484426936895553,0,0,0,0,0,0,0,0,334.761171482544,0.20170506870352,0,0,0,0,1.01306376927592,0,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0.177404740325278,0,0,1.08751572762931,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.196308467114945,0,1.2679671827502,0,0.0939839179798536,2.06265241515447,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,52.211523072367,96.1991227260681,0,0,0,0,0.0645889098360061,0.496597714366863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,3.21150785836475,0.140954404095971,0,1.78784437770915,0,5.06599756336621,0.631719873426831,2.08948502559871,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4624275105164,0.767175371061182,0,0,0,0,0,0,0,0,28.2259907697571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.933633106199299,0,1.30769522490767,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,1.13432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,5.88034845542168,0,0,147.10668676367,0,0,9.09309394582185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0,0.714889968290738,23.3327290318321,2.46972101034231,0,0.710783897485092,1.58390374586686,0,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,0,0,0,0,157.470251247276,0,1.07834031980251,1.07452572308291,0,7.62683738564743,3.62541734785571,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,1.90630193923825,0,0,0,0,0.359744915166629,2.19629623788844,1.88499843753098,0,0,0,3.41343617362713,0,0,0,0.141405431953713,0,0,0,0,14.4693883566672,7.21484227251296,0,0,0,0.430234056612155,0,0,0.709522128141196,0,0,0.379473173765715,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.851692475380653,1.37402137902306,0,0.671028323677248,0.166849141711909,0.390776190804081,124.169153557278,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0.831058409500782,15.5661005825855,21.3708162406336,13.5935485450433,6.07211944717392,0.317873157960757,0,0,0,0,0,0,0.611030144933625,0,0,0,34.3071766871646,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.577901179803038,1.20084057741958,0,0,15.9013213325384,0,0,0,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,7.02891481008975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.904980694530854,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0.751145584238999,0,0.110929051536852,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0.378806010550178,0,0.889811221596536,0,0.151230923763239,0.310874401165561,0,56.7096491102781,24.7391711689983,105.578810675856,0,0,0,0.300515217994437,0,106.600132099621,53.2816571463499,22.9858592070925,23.6657217538032,17.1181232140405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0.786329709279482,0,0,0.212574920101683,0,0,0,0,0,0,0,29.6739019945643,0,0.319267718114302,0.82046545696302,0,0.829887029570615,0.484426936895553,0,0,0,0,0,0,0,0,334.761171482544,0.20170506870352,0,0,0,0,1.01306376927592,0,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0.177404740325278,0,0,1.08751572762931,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.196308467114945,0,1.2679671827502,0,0.0939839179798536,2.06265241515447,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,52.211523072367,96.1991227260681,0,0,0,0,0.0645889098360061,0.496597714366863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@STAR | |short_description=p1@STAR | ||
}} | }} |
Latest revision as of 02:58, 18 September 2015
Short description: | p1@STAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STAR_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000520114_5end |
EntrezGene: | STAR |
HGNC: | 11359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 7.96e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gonad | 2.85e-22 | 21 |
indifferent external genitalia | 2.85e-22 | 21 |
indifferent gonad | 2.85e-22 | 21 |
gonad primordium | 2.85e-22 | 21 |
external genitalia | 4.00e-21 | 22 |
female gonad | 5.37e-21 | 13 |
right ovary | 6.83e-18 | 5 |
body cavity | 8.42e-12 | 46 |
body cavity precursor | 4.66e-11 | 54 |
body cavity or lining | 7.14e-11 | 49 |
reproductive organ | 1.32e-09 | 48 |
anatomical cavity | 2.23e-09 | 61 |
left ovary | 8.63e-09 | 4 |
reproductive structure | 2.88e-07 | 59 |
reproductive system | 2.88e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.30e-15 | 14 |
reproductive organ cancer | 2.60e-08 | 29 |
female reproductive organ cancer | 3.55e-07 | 27 |
chronic leukemia | 5.01e-07 | 8 |