FFCP PHASE1:Hg19::chr4:57522701..57522712,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503639_5end | |association_with_transcript=0bp_to_ENST00000503639_5end | ||
|cluster_id=chr4:57522701..57522712,- | |||
|coexpression_cluster_id=C4422 | |||
|description=CAGE_peak_10_at_HOPX_5end | |description=CAGE_peak_10_at_HOPX_5end | ||
|id=chr4:57522701..57522712,- | |id=chr4:57522701..57522712,- | ||
|ontology_enrichment_celltype=CL:0000791!6.13e-15!18;CL:0000789!6.13e-15!18;CL:0002420!6.13e-15!18;CL:0002419!6.13e-15!18;CL:0000790!6.13e-15!18;CL:0000084!5.32e-12!25;CL:0000827!5.32e-12!25;CL:0000625!3.99e-11!11;CL:0000838!1.86e-08!52;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53 | |ontology_enrichment_celltype=CL:0000791!6.13e-15!18;CL:0000789!6.13e-15!18;CL:0002420!6.13e-15!18;CL:0002419!6.13e-15!18;CL:0000790!6.13e-15!18;CL:0000084!5.32e-12!25;CL:0000827!5.32e-12!25;CL:0000625!3.99e-11!11;CL:0000838!1.86e-08!52;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.55e-19;11!CL:0000791;6.22e-15;18!CL:0000789;6.22e-15;18!CL:0002419;6.22e-15;18!CL:0000623;1.92e-14;3!CL:0000084;2.16e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.38e-19,11;CL:0000791,6.50e-15,18;CL:0000789,6.50e-15,18;CL:0002420,6.50e-15,18;CL:0002419,6.50e-15,18;CL:0000790,6.50e-15,18;CL:0000623,1.89e-14,3;CL:0000825,1.89e-14,3;CL:0000084,2.22e-10,25;CL:0000827,2.22e-10,25;CL:0000838,4.96e-10,52;CL:0000542,8.53e-10,53;CL:0000051,8.53e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.22e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.21e-31!115;UBERON:0001049!2.91e-21!57;UBERON:0005068!2.91e-21!57;UBERON:0006241!2.91e-21!57;UBERON:0007135!2.91e-21!57;UBERON:0002780!4.14e-20!41;UBERON:0001890!4.14e-20!41;UBERON:0006240!4.14e-20!41;UBERON:0001893!1.74e-19!34;UBERON:0003080!2.19e-19!42;UBERON:0002791!1.61e-18!33;UBERON:0001869!3.11e-18!32;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0002616!1.93e-16!59;UBERON:0001017!3.17e-16!82;UBERON:0005743!1.23e-15!86;UBERON:0003075!8.16e-14!86;UBERON:0007284!8.16e-14!86;UBERON:0000956!1.07e-13!25;UBERON:0000203!1.07e-13!25;UBERON:0000073!1.63e-13!94;UBERON:0001016!1.63e-13!94;UBERON:0000955!3.87e-13!69;UBERON:0006238!3.87e-13!69;UBERON:0001950!5.68e-13!20;UBERON:0003056!6.89e-13!61;UBERON:0002619!7.83e-13!22;UBERON:0002346!1.29e-12!90;UBERON:0000153!4.71e-11!129;UBERON:0007811!4.71e-11!129;UBERON:0000033!6.46e-10!123;UBERON:0002420!7.52e-08!9;UBERON:0007245!7.52e-08!9;UBERON:0010009!7.52e-08!9;UBERON:0010011!7.52e-08!9;UBERON:0000454!7.52e-08!9;UBERON:0004121!1.01e-07!169;UBERON:0000924!3.22e-07!173;UBERON:0006601!3.22e-07!173;UBERON:0001871!7.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.01e-10;25!UBERON:0000203;8.01e-10;25!UBERON:0001950;1.21e-09;20!UBERON:0002619;1.01e-08;22!UBERON:0001869;8.48e-08;32!UBERON:0001893;1.41e-07;34!UBERON:0002791;2.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.07e-09,25;UBERON:0000203,1.07e-09,25;UBERON:0001950,1.43e-09,20;UBERON:0002619,1.17e-08,22;UBERON:0002791,2.22e-07,32;UBERON:0001869,2.22e-07,32;UBERON:0002780,5.81e-07,41;UBERON:0001890,5.81e-07,41;UBERON:0003080,5.81e-07,41;UBERON:0006240,5.81e-07,41;UBERON:0003528,6.87e-07,34;UBERON:0002020,6.87e-07,34;UBERON:0001893,6.87e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.410623275218653,1.00434111675842,0,0,0,0.786728553697808,3.45446458287491,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,3.22960483268332,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,1.32208974556972,0.954053754535364,0,0,0.764546456250458,2.64342657158052,0.560508562981536,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,3.89936599098108,0.883817722424512,0.221533894583621,0,1.5370958367081,1.69077151827842,0.164437904603676,0.552700035571697,0,0,0,0,6.00539516297101,1.14966148080576,0.68725489096526,1.26509846009751,1.59282707162048,0.651083453856419,0,0.903450714466637,0.383959833463255,1.24930726552346,2.36777252044017,4.10563998460523,1.61285394579786,4.54648332831962,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,3.23441362289276,3.20857590699371,0.508189248444927,0,0.773288812777695,0.670065061337395,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0,0,0.620304078368662,0.215714200818617,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0.798317485731266,5.36215036370627,4.65681881992542,0,3.93116049358842,0,0,0,1.35433422241283,0,0,0,0,0.307240764308458,0,0,0,0,0,0,3.99686361597384,0,0,0,0,0,0,0,0,0,3.97659059106519,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,4.7896618469388,0,0,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0,0.87754158861589,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.370691816839509,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.696418755514666,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,3.29470915235301,0.500763722825999,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,2.8339315265117,0.478901577171454,2.05116364240755,0,0.553258019713743,1.29180516505481,0,0,0,0.550285795565037,0,0,0,0,0.300841313397029,0,0,0,0,0,0.945526184657525,1.56215619722769,1.03343398250592,0.253663240775627,0,0,0.992422356778588,0,0.127762427639595,1.07140367175657,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.591954962065642,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0.414432328326074,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,1.22574160876953,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,1.01987235286372,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,0,0.20686599172379,0,0,0.129177819672012,0.0620747142958579,0.784923038064294,0.0636471582781649,0,0.870866991587845,1.02669990325584,0.740872583160463,0.502055437748735,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.410623275218653,1.00434111675842,0,0,0,0.786728553697808,3.45446458287491,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,3.22960483268332,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,1.32208974556972,0.954053754535364,0,0,0.764546456250458,2.64342657158052,0.560508562981536,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,3.89936599098108,0.883817722424512,0.221533894583621,0,1.5370958367081,1.69077151827842,0.164437904603676,0.552700035571697,0,0,0,0,6.00539516297101,1.14966148080576,0.68725489096526,1.26509846009751,1.59282707162048,0.651083453856419,0,0.903450714466637,0.383959833463255,1.24930726552346,2.36777252044017,4.10563998460523,1.61285394579786,4.54648332831962,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,3.23441362289276,3.20857590699371,0.508189248444927,0,0.773288812777695,0.670065061337395,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0,0,0.620304078368662,0.215714200818617,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0.798317485731266,5.36215036370627,4.65681881992542,0,3.93116049358842,0,0,0,1.35433422241283,0,0,0,0,0.307240764308458,0,0,0,0,0,0,3.99686361597384,0,0,0,0,0,0,0,0,0,3.97659059106519,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,4.7896618469388,0,0,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0,0.87754158861589,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.370691816839509,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0.696418755514666,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,3.29470915235301,0.500763722825999,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,2.8339315265117,0.478901577171454,2.05116364240755,0,0.553258019713743,1.29180516505481,0,0,0,0.550285795565037,0,0,0,0,0.300841313397029,0,0,0,0,0,0.945526184657525,1.56215619722769,1.03343398250592,0.253663240775627,0,0,0.992422356778588,0,0.127762427639595,1.07140367175657,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.591954962065642,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0.414432328326074,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,1.22574160876953,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,1.01987235286372,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,0,0.20686599172379,0,0,0.129177819672012,0.0620747142958579,0.784923038064294,0.0636471582781649,0,0.870866991587845,1.02669990325584,0.740872583160463,0.502055437748735,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p10@HOPX | |short_description=p10@HOPX | ||
}} | }} |
Latest revision as of 02:56, 18 September 2015
Short description: | p10@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOPX_5end |
Coexpression cluster: | C4422_Osteoblast_CD4_CD34_acute_CD133_Natural_CD8 |
Association with transcript: | 0bp_to_ENST00000503639_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.38e-19 | 11 |
mature alpha-beta T cell | 6.50e-15 | 18 |
alpha-beta T cell | 6.50e-15 | 18 |
immature T cell | 6.50e-15 | 18 |
mature T cell | 6.50e-15 | 18 |
immature alpha-beta T cell | 6.50e-15 | 18 |
natural killer cell | 1.89e-14 | 3 |
pro-NK cell | 1.89e-14 | 3 |
T cell | 2.22e-10 | 25 |
pro-T cell | 2.22e-10 | 25 |
lymphoid lineage restricted progenitor cell | 4.96e-10 | 52 |
lymphocyte | 8.53e-10 | 53 |
common lymphoid progenitor | 8.53e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.07e-09 | 25 |
pallium | 1.07e-09 | 25 |
neocortex | 1.43e-09 | 20 |
regional part of cerebral cortex | 1.17e-08 | 22 |
regional part of telencephalon | 2.22e-07 | 32 |
cerebral hemisphere | 2.22e-07 | 32 |
regional part of forebrain | 5.81e-07 | 41 |
forebrain | 5.81e-07 | 41 |
anterior neural tube | 5.81e-07 | 41 |
future forebrain | 5.81e-07 | 41 |
brain grey matter | 6.87e-07 | 34 |
gray matter | 6.87e-07 | 34 |
telencephalon | 6.87e-07 | 34 |