FFCP PHASE1:Hg19::chr9:88969339..88969422,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:88969339..88969422,-
|short_description=p2@ZCCHC6
|description=CAGE_peak_2_at_ZCCHC6_5end
|association_with_transcript=0bp_to_ENST00000375960,ENST000003759...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79670 | |EntrezGene=79670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25817 | |HGNC=25817 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VYS8,Q96KX5 | |UniProt=Q5VYS8,Q96KX5 | ||
|association_with_transcript=0bp_to_ENST00000375960,ENST00000375961,NM_001185059,NM_001185074,NM_024617,uc004aoq.2,uc004aor.2,uc004aos.2,uc004aot.2,uc004aou.2,uc004aov.2,uc004aow.2,uc010mqf.1_5end | |||
|cluster_id=chr9:88969339..88969422,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_ZCCHC6_5end | |||
|id=chr9:88969339..88969422,- | |||
|ontology_enrichment_celltype=CL:0000738!6.84e-41!140;CL:0002031!2.40e-35!124;CL:0002087!9.62e-33!119;CL:0000766!2.22e-30!76;CL:0000037!8.36e-30!172;CL:0000566!8.36e-30!172;CL:0002032!2.01e-28!165;CL:0000837!2.01e-28!165;CL:0000557!1.72e-26!71;CL:0000839!2.80e-26!70;CL:0002057!3.39e-26!42;CL:0000860!7.74e-25!45;CL:0002009!3.31e-24!65;CL:0000988!7.68e-24!182;CL:0002194!1.77e-23!63;CL:0000576!1.77e-23!63;CL:0000040!1.77e-23!63;CL:0000559!1.77e-23!63;CL:0000763!5.03e-19!112;CL:0000049!5.03e-19!112;CL:0000838!3.79e-09!52;CL:0000791!6.60e-09!18;CL:0000789!6.60e-09!18;CL:0002420!6.60e-09!18;CL:0002419!6.60e-09!18;CL:0000790!6.60e-09!18;CL:0000542!7.23e-09!53;CL:0000051!7.23e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.80e-20;33!CL:0002057;8.80e-20;33!CL:0000576;8.62e-17;48!CL:0000473;2.13e-16;39!CL:0000234;2.13e-16;39!CL:0000766;5.05e-14;69!CL:0002087;4.13e-11;104!CL:0000738;3.97e-09;136!CL:0000791;5.85e-09;18!CL:0000789;5.85e-09;18!CL:0002419;5.85e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.93e-41,136;CL:0002031,6.62e-36,120;CL:0002087,2.78e-33,115;CL:0000766,2.30e-31,72;CL:0000037,5.15e-30,168;CL:0002032,1.22e-28,161;CL:0000837,1.22e-28,161;CL:0000557,2.12e-27,67;CL:0000839,3.39e-27,66;CL:0000860,3.38e-26,42;CL:0002057,3.38e-26,42;CL:0000473,1.76e-25,48;CL:0000234,1.76e-25,48;CL:0002009,4.02e-25,61;CL:0000988,1.15e-24,177;CL:0002194,2.14e-24,59;CL:0000576,2.14e-24,59;CL:0000040,2.14e-24,59;CL:0000559,2.14e-24,59;CL:0000763,2.74e-19,108;CL:0000049,2.74e-19,108;CL:0000838,3.79e-09,52;CL:0000791,6.60e-09,18;CL:0000789,6.60e-09,18;CL:0002420,6.60e-09,18;CL:0002419,6.60e-09,18;CL:0000790,6.60e-09,18;CL:0000542,7.23e-09,53;CL:0000051,7.23e-09,53;CL:0000134,5.86e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.07e-19;42!CL:0000790;5.85e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.19e-29!102;UBERON:0003061!6.19e-29!102;UBERON:0002193!2.73e-24!112;UBERON:0002371!1.79e-22!80;UBERON:0001474!1.85e-20!86;UBERON:0007023!2.71e-17!115;UBERON:0004765!9.90e-17!101;UBERON:0001434!9.90e-17!101;UBERON:0002405!1.06e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-29,98;UBERON:0003061,1.52e-29,98;UBERON:0002193,1.07e-24,108;UBERON:0002371,4.21e-23,76;UBERON:0001474,5.93e-21,82;UBERON:0002405,4.24e-20,93;UBERON:0007023,4.86e-17,114;UBERON:0004765,6.19e-17,90;UBERON:0001434,1.43e-15,100 | |||
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| ||
|short_description=p2@ZCCHC6 | |||
}} | }} |
Latest revision as of 02:42, 18 September 2015
Short description: | p2@ZCCHC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000375960, ENST00000375961, NM_001185059, NM_001185074, NM_024617, uc004aoq.2, uc004aor.2, uc004aos.2, uc004aot.2, uc004aou.2, uc004aov.2, uc004aow.2, uc010mqf.1_5end |
EntrezGene: | ZCCHC6 |
HGNC: | 25817 |
UniProt: | Q5VYS8Q96KX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-29 | 98 |
blood island | 1.52e-29 | 98 |
hemolymphoid system | 1.07e-24 | 108 |
bone marrow | 4.21e-23 | 76 |
bone element | 5.93e-21 | 82 |
immune system | 4.24e-20 | 93 |
adult organism | 4.86e-17 | 114 |
skeletal element | 6.19e-17 | 90 |
skeletal system | 1.43e-15 | 100 |