FFCP PHASE1:Hg19::chr9:88969303..88969335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79670 | |EntrezGene=79670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25817 | |HGNC=25817 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VYS8 | |UniProt=Q5VYS8 | ||
|association_with_transcript=0bp_to_ENST00000277141,ENST00000375963_5end | |association_with_transcript=0bp_to_ENST00000277141,ENST00000375963_5end | ||
|cluster_id=chr9:88969303..88969335,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_ZCCHC6_5end | |description=CAGE_peak_1_at_ZCCHC6_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.81e-40!140;CL:0002031!5.51e-34!124;CL:0002087!2.40e-33!119;CL:0000037!1.16e-31!172;CL:0000566!1.16e-31!172;CL:0002032!5.38e-30!165;CL:0000837!5.38e-30!165;CL:0000766!1.62e-28!76;CL:0002057!8.98e-27!42;CL:0000988!2.46e-25!182;CL:0000839!2.69e-24!70;CL:0002009!3.99e-24!65;CL:0000557!4.71e-24!71;CL:0000860!7.30e-24!45;CL:0002194!3.44e-23!63;CL:0000576!3.44e-23!63;CL:0000040!3.44e-23!63;CL:0000559!3.44e-23!63;CL:0000763!8.13e-20!112;CL:0000049!8.13e-20!112;CL:0000134!1.02e-11!358;CL:0002320!3.75e-10!365;CL:0000542!1.67e-09!53;CL:0000051!1.67e-09!53;CL:0000838!2.40e-09!52;CL:0000219!3.17e-07!390 | |ontology_enrichment_celltype=CL:0000738!1.81e-40!140;CL:0002031!5.51e-34!124;CL:0002087!2.40e-33!119;CL:0000037!1.16e-31!172;CL:0000566!1.16e-31!172;CL:0002032!5.38e-30!165;CL:0000837!5.38e-30!165;CL:0000766!1.62e-28!76;CL:0002057!8.98e-27!42;CL:0000988!2.46e-25!182;CL:0000839!2.69e-24!70;CL:0002009!3.99e-24!65;CL:0000557!4.71e-24!71;CL:0000860!7.30e-24!45;CL:0002194!3.44e-23!63;CL:0000576!3.44e-23!63;CL:0000040!3.44e-23!63;CL:0000559!3.44e-23!63;CL:0000763!8.13e-20!112;CL:0000049!8.13e-20!112;CL:0000134!1.02e-11!358;CL:0002320!3.75e-10!365;CL:0000542!1.67e-09!53;CL:0000051!1.67e-09!53;CL:0000838!2.40e-09!52;CL:0000219!3.17e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.37e-20;33!CL:0002057;5.37e-20;33!CL:0000576;5.79e-17;48!CL:0000473;4.93e-16;39!CL:0000234;4.93e-16;39!CL:0000766;1.77e-13;69!CL:0002087;1.19e-11;104!CL:0000738;2.14e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;5.37e-20;33!CL:0002057;5.37e-20;33!CL:0000576;5.79e-17;48!CL:0000473;4.93e-16;39!CL:0000234;4.93e-16;39!CL:0000766;1.77e-13;69!CL:0002087;1.19e-11;104!CL:0000738;2.14e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.60e-42,136;CL:0002031,2.23e-35,120;CL:0002087,9.03e-35,115;CL:0000037,1.28e-32,168;CL:0002032,5.99e-31,161;CL:0000837,5.99e-31,161;CL:0000766,2.03e-30,72;CL:0000860,8.98e-27,42;CL:0002057,8.98e-27,42;CL:0000988,9.06e-27,177;CL:0000839,4.47e-26,66;CL:0002009,5.06e-26,61;CL:0000557,8.58e-26,67;CL:0000473,1.89e-25,48;CL:0000234,1.89e-25,48;CL:0002194,4.48e-25,59;CL:0000576,4.48e-25,59;CL:0000040,4.48e-25,59;CL:0000559,4.48e-25,59;CL:0000763,8.88e-21,108;CL:0000049,8.88e-21,108;CL:0000134,1.78e-12,354;CL:0002320,7.65e-11,361;CL:0000542,1.67e-09,53;CL:0000051,1.67e-09,53;CL:0000838,2.40e-09,52;CL:0000219,8.90e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.71e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-27!102;UBERON:0003061!1.81e-27!102;UBERON:0002193!3.14e-24!112;UBERON:0002371!1.38e-20!80;UBERON:0001474!2.98e-18!86;UBERON:0002405!3.88e-17!115;UBERON:0004765!1.37e-14!101;UBERON:0001434!1.37e-14!101;UBERON:0002384!2.67e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!1.81e-27!102;UBERON:0003061!1.81e-27!102;UBERON:0002193!3.14e-24!112;UBERON:0002371!1.38e-20!80;UBERON:0001474!2.98e-18!86;UBERON:0002405!3.88e-17!115;UBERON:0004765!1.37e-14!101;UBERON:0001434!1.37e-14!101;UBERON:0002384!2.67e-10!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.18e-29,98;UBERON:0003061,7.18e-29,98;UBERON:0002193,2.27e-25,108;UBERON:0002371,6.02e-22,76;UBERON:0002405,1.00e-20,93;UBERON:0001474,2.14e-19,82;UBERON:0004765,9.63e-16,90;UBERON:0001434,7.03e-14,100;UBERON:0002384,5.45e-11,371;UBERON:0003081,6.81e-07,203 | |||
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| ||
|short_description=p1@ZCCHC6 | |short_description=p1@ZCCHC6 | ||
}} | }} |
Latest revision as of 02:41, 18 September 2015
Short description: | p1@ZCCHC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZCCHC6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000277141, ENST00000375963_5end |
EntrezGene: | ZCCHC6 |
HGNC: | 25817 |
UniProt: | Q5VYS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.60e-42 | 136 |
hematopoietic lineage restricted progenitor cell | 2.23e-35 | 120 |
nongranular leukocyte | 9.03e-35 | 115 |
hematopoietic stem cell | 1.28e-32 | 168 |
hematopoietic oligopotent progenitor cell | 5.99e-31 | 161 |
hematopoietic multipotent progenitor cell | 5.99e-31 | 161 |
myeloid leukocyte | 2.03e-30 | 72 |
classical monocyte | 8.98e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.98e-27 | 42 |
hematopoietic cell | 9.06e-27 | 177 |
myeloid lineage restricted progenitor cell | 4.47e-26 | 66 |
macrophage dendritic cell progenitor | 5.06e-26 | 61 |
granulocyte monocyte progenitor cell | 8.58e-26 | 67 |
defensive cell | 1.89e-25 | 48 |
phagocyte | 1.89e-25 | 48 |
monopoietic cell | 4.48e-25 | 59 |
monocyte | 4.48e-25 | 59 |
monoblast | 4.48e-25 | 59 |
promonocyte | 4.48e-25 | 59 |
myeloid cell | 8.88e-21 | 108 |
common myeloid progenitor | 8.88e-21 | 108 |
mesenchymal cell | 1.78e-12 | 354 |
connective tissue cell | 7.65e-11 | 361 |
lymphocyte | 1.67e-09 | 53 |
common lymphoid progenitor | 1.67e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.40e-09 | 52 |
motile cell | 8.90e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.18e-29 | 98 |
blood island | 7.18e-29 | 98 |
hemolymphoid system | 2.27e-25 | 108 |
bone marrow | 6.02e-22 | 76 |
immune system | 1.00e-20 | 93 |
bone element | 2.14e-19 | 82 |
skeletal element | 9.63e-16 | 90 |
skeletal system | 7.03e-14 | 100 |
connective tissue | 5.45e-11 | 371 |
lateral plate mesoderm | 6.81e-07 | 203 |