FFCP PHASE1:Hg19::chr9:88969226..88969237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79670 | |EntrezGene=79670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25817 | |HGNC=25817 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_ENST00000277141_5end | |association_with_transcript=87bp_to_ENST00000277141_5end | ||
|cluster_id=chr9:88969226..88969237,- | |||
|description=CAGE_peak_4_at_ZCCHC6_5end | |description=CAGE_peak_4_at_ZCCHC6_5end | ||
|id=chr9:88969226..88969237,- | |id=chr9:88969226..88969237,- | ||
|ontology_enrichment_celltype=CL:0002057!4.71e-22!42;CL:0000860!9.49e-20!45;CL:0002009!1.14e-14!65;CL:0002194!4.19e-14!63;CL:0000576!4.19e-14!63;CL:0000040!4.19e-14!63;CL:0000559!4.19e-14!63;CL:0000557!2.96e-13!71;CL:0000766!4.73e-13!76;CL:0000839!6.97e-13!70;CL:0002620!3.59e-07!23;CL:0000763!4.58e-07!112;CL:0000049!4.58e-07!112 | |ontology_enrichment_celltype=CL:0002057!4.71e-22!42;CL:0000860!9.49e-20!45;CL:0002009!1.14e-14!65;CL:0002194!4.19e-14!63;CL:0000576!4.19e-14!63;CL:0000040!4.19e-14!63;CL:0000559!4.19e-14!63;CL:0000557!2.96e-13!71;CL:0000766!4.73e-13!76;CL:0000839!6.97e-13!70;CL:0002620!3.59e-07!23;CL:0000763!4.58e-07!112;CL:0000049!4.58e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-27;33!CL:0002057;1.78e-27;33!CL:0000576;3.77e-22;48!CL:0000473;5.64e-18;39!CL:0000234;5.64e-18;39!CL:0000766;1.47e-12;69!CL:0002620;3.97e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.88e-33,42;CL:0002057,1.88e-33,42;CL:0000473,2.66e-27,48;CL:0000234,2.66e-27,48;CL:0002009,2.32e-23,61;CL:0002194,3.77e-23,59;CL:0000576,3.77e-23,59;CL:0000040,3.77e-23,59;CL:0000559,3.77e-23,59;CL:0000766,4.91e-22,72;CL:0000557,2.46e-21,67;CL:0000839,1.58e-20,66;CL:0000763,3.68e-12,108;CL:0000049,3.68e-12,108;CL:0002320,3.69e-09,361;CL:0000134,8.68e-09,354;CL:0000048,1.10e-07,427;CL:0000723,3.65e-07,433;CL:0000219,4.36e-07,386;CL:0002620,7.40e-07,23;CL:0002087,7.83e-07,115;CL:0000034,8.89e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!9.41e-13!101;UBERON:0001434!9.41e-13!101;UBERON:0002371!5.74e-12!80;UBERON:0001474!8.06e-12!86;UBERON:0002204!1.64e-11!167;UBERON:0002390!3.16e-08!102;UBERON:0003061!3.16e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.51e-20,82;UBERON:0002371,6.76e-20,76;UBERON:0004765,1.58e-19,90;UBERON:0001434,1.17e-17,100;UBERON:0002390,1.53e-15,98;UBERON:0003061,1.53e-15,98;UBERON:0002405,3.68e-14,93;UBERON:0002193,2.68e-13,108;UBERON:0002204,2.30e-12,167;UBERON:0002384,1.76e-08,371;UBERON:0003081,4.76e-07,203 | |||
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| ||
|short_description=p4@ZCCHC6 | |short_description=p4@ZCCHC6 | ||
}} | }} |
Latest revision as of 02:38, 18 September 2015
Short description: | p4@ZCCHC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZCCHC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000277141_5end |
EntrezGene: | ZCCHC6 |
HGNC: | 25817 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.88e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-33 | 42 |
defensive cell | 2.66e-27 | 48 |
phagocyte | 2.66e-27 | 48 |
macrophage dendritic cell progenitor | 2.32e-23 | 61 |
monopoietic cell | 3.77e-23 | 59 |
monocyte | 3.77e-23 | 59 |
monoblast | 3.77e-23 | 59 |
promonocyte | 3.77e-23 | 59 |
myeloid leukocyte | 4.91e-22 | 72 |
granulocyte monocyte progenitor cell | 2.46e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.58e-20 | 66 |
myeloid cell | 3.68e-12 | 108 |
common myeloid progenitor | 3.68e-12 | 108 |
connective tissue cell | 3.69e-09 | 361 |
mesenchymal cell | 8.68e-09 | 354 |
multi fate stem cell | 1.10e-07 | 427 |
somatic stem cell | 3.65e-07 | 433 |
motile cell | 4.36e-07 | 386 |
skin fibroblast | 7.40e-07 | 23 |
nongranular leukocyte | 7.83e-07 | 115 |
stem cell | 8.89e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.51e-20 | 82 |
bone marrow | 6.76e-20 | 76 |
skeletal element | 1.58e-19 | 90 |
skeletal system | 1.17e-17 | 100 |
hematopoietic system | 1.53e-15 | 98 |
blood island | 1.53e-15 | 98 |
immune system | 3.68e-14 | 93 |
hemolymphoid system | 2.68e-13 | 108 |
musculoskeletal system | 2.30e-12 | 167 |
connective tissue | 1.76e-08 | 371 |
lateral plate mesoderm | 4.76e-07 | 203 |