FFCP PHASE1:Hg19::chr3:37725131..37725145,+: Difference between revisions
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|id=chr3:37725131..37725145,+
|short_description=p4@ITGA9
|description=CAGE_peak_4_at_ITGA9_5end
|association_with_transcript=-221bp_to_ENST00000461533_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3680 | |EntrezGene=3680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6145 | |HGNC=6145 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-221bp_to_ENST00000461533_5end | |||
|cluster_id=chr3:37725131..37725145,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_4_at_ITGA9_5end | |||
|id=chr3:37725131..37725145,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.51e-53;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!2.87e-53!5;UBERON:0004117!2.87e-53!5;UBERON:0007689!2.87e-53!5;UBERON:0007123!2.87e-53!5;UBERON:0003091!2.87e-53!5;UBERON:0000341!5.04e-34!2;UBERON:0009722!5.49e-25!11;UBERON:0007690!5.49e-25!11;UBERON:0008814!1.13e-18!15;UBERON:0002368!1.14e-08!35;UBERON:0000974!6.13e-08!10;UBERON:0000949!5.58e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.51e-53;5!UBERON:0000341;5.96e-34;2!UBERON:0000974;2.59e-12;6!UBERON:0002368;5.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.87e-53,5;UBERON:0004117,2.87e-53,5;UBERON:0007689,2.87e-53,5;UBERON:0007123,2.87e-53,5;UBERON:0003091,2.87e-53,5;UBERON:0000341,5.04e-34,2;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0002368,1.14e-08,35;UBERON:0000974,6.13e-08,10;UBERON:0000949,5.58e-07,45 | |||
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|short_description=p4@ITGA9 | |||
}} | }} |
Latest revision as of 02:36, 18 September 2015
Short description: | p4@ITGA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA9_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -221bp_to_ENST00000461533_5end |
EntrezGene: | ITGA9 |
HGNC: | 6145 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.87e-53 | 5 |
pharyngeal pouch | 2.87e-53 | 5 |
thyroid diverticulum | 2.87e-53 | 5 |
pharyngeal pouch 2 | 2.87e-53 | 5 |
thyroid primordium | 2.87e-53 | 5 |
throat | 5.04e-34 | 2 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
endocrine gland | 1.14e-08 | 35 |
neck | 6.13e-08 | 10 |
endocrine system | 5.58e-07 | 45 |