FFCP PHASE1:Hg19::chr3:37493675..37493680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3680 | |EntrezGene=3680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6145 | |HGNC=6145 | ||
|TSSclassifier=strong | |||
|UniProt=Q13797 | |UniProt=Q13797 | ||
|association_with_transcript=65bp_to_ENST00000264741_5end | |association_with_transcript=65bp_to_ENST00000264741_5end | ||
|cluster_id=chr3:37493675..37493680,+ | |||
|coexpression_cluster_id=C4327 | |coexpression_cluster_id=C4327 | ||
|description=CAGE_peak_3_at_ITGA9_5end | |description=CAGE_peak_3_at_ITGA9_5end | ||
|id=chr3:37493675..37493680,+ | |id=chr3:37493675..37493680,+ | ||
|ontology_enrichment_celltype=CL:0000097;1.13e-14;5!CL:0002032;1.09e-08;1!CL:0000557;1.09e-08;1!CL:0000163;2.29e-08;9 | |ontology_enrichment_celltype=CL:0002274!4.05e-09!5;CL:0000457!4.05e-09!5;CL:0002191!4.05e-09!5;CL:0000097!4.05e-09!5;CL:0000831!4.05e-09!5;CL:0002028!4.05e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;1.13e-14;5!CL:0002032;1.09e-08;1!CL:0000557;1.09e-08;1!CL:0000163;2.29e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.08e-14,5;CL:0002028,1.08e-14,5;CL:0000163,2.24e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.01e-17;4!UBERON:0007284;1.01e-17;4!UBERON:0004872;5.14e-10;7!UBERON:0006298;1.09e-08;1!UBERON:0006242;1.09e-08;1!UBERON:0004140;1.09e-08;1!UBERON:0005425;1.09e-08;1!UBERON:0003104;5.43e-08;31!UBERON:0007123;8.65e-07;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003978;2.02e-23;3!UBERON:0000946;2.02e-23;3!UBERON:0002133;4.46e-16;2!UBERON:0002106;9.33e-11;3!UBERON:0007100;2.27e-10;25!UBERON:0002146;4.18e-09;1!UBERON:0002134;4.18e-09;1!UBERON:0005208;4.18e-09;1!UBERON:0005623;4.18e-09;1!UBERON:0004145;4.18e-09;1!UBERON:0005946;4.18e-09;1!UBERON:0005965;4.18e-09;1!UBERON:0002078;4.18e-09;1!UBERON:0005795;1.09e-08;1!UBERON:0000029;1.09e-08;1!UBERON:0001736;1.09e-08;1!UBERON:0002135;1.09e-08;1!UBERON:0000941;1.09e-08;1!UBERON:0001785;1.09e-08;1!UBERON:0002464;1.09e-08;1!UBERON:0004904;1.09e-08;1!UBERON:0001021;1.09e-08;1!UBERON:0010313;2.19e-07;10!UBERON:0002046;8.65e-07;5!UBERON:0004177;8.65e-07;5!UBERON:0005057;8.65e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-45!115;UBERON:0001049!4.57e-10!57;UBERON:0005068!4.57e-10!57;UBERON:0006241!4.57e-10!57;UBERON:0007135!4.57e-10!57;UBERON:0002346!2.47e-08!90;UBERON:0003075!2.48e-08!86;UBERON:0007284!2.48e-08!86;UBERON:0000468!1.35e-07!659;UBERON:0002616!1.36e-07!59;UBERON:0002298!1.39e-07!8;UBERON:0000073!3.20e-07!94;UBERON:0001016!3.20e-07!94;UBERON:0000477!3.68e-07!286;UBERON:0001893!5.72e-07!34;UBERON:0002020!7.01e-07!34;UBERON:0003528!7.01e-07!34;UBERON:0000062!9.85e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.02e-23;3!UBERON:0000946;2.02e-23;3!UBERON:0002133;4.46e-16;2!UBERON:0002106;9.33e-11;3!UBERON:0007100;2.27e-10;25!UBERON:0002146;4.18e-09;1!UBERON:0002134;4.18e-09;1!UBERON:0005208;4.18e-09;1!UBERON:0005623;4.18e-09;1!UBERON:0004145;4.18e-09;1!UBERON:0005946;4.18e-09;1!UBERON:0005965;4.18e-09;1!UBERON:0002078;4.18e-09;1!UBERON:0005795;1.09e-08;1!UBERON:0000029;1.09e-08;1!UBERON:0001736;1.09e-08;1!UBERON:0002135;1.09e-08;1!UBERON:0000941;1.09e-08;1!UBERON:0001785;1.09e-08;1!UBERON:0002464;1.09e-08;1!UBERON:0004904;1.09e-08;1!UBERON:0001021;1.09e-08;1!UBERON:0010313;2.19e-07;10!UBERON:0002046;8.65e-07;5!UBERON:0004177;8.65e-07;5!UBERON:0005057;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.59e-23,3;UBERON:0009751,3.59e-23,3;UBERON:0000946,3.59e-23,3;UBERON:0002523,3.59e-23,3;UBERON:0005983,3.59e-23,3;UBERON:0002165,3.59e-23,3;UBERON:0002062,3.59e-23,3;UBERON:0007280,3.59e-23,3;UBERON:0002133,9.16e-16,2;UBERON:0002106,1.03e-10,3;UBERON:0004854,1.03e-10,3;UBERON:0009034,1.03e-10,3;UBERON:0002095,1.03e-10,3;UBERON:0004782,1.03e-10,3;UBERON:0003281,1.03e-10,3;UBERON:0009664,1.03e-10,3;UBERON:0002296,1.03e-10,3;UBERON:0005602,1.03e-10,3;UBERON:0001179,1.03e-10,3;UBERON:0006293,1.03e-10,3;UBERON:0004797,2.98e-10,7;UBERON:0007023,3.99e-10,114;UBERON:0007100,1.40e-09,27;UBERON:0002146,3.58e-09,1;UBERON:0005623,3.58e-09,1;UBERON:0002134,4.52e-09,1;UBERON:0005208,4.52e-09,1;UBERON:0005946,4.52e-09,1;UBERON:0005965,4.52e-09,1;UBERON:0002078,4.52e-09,1;UBERON:0000029,5.28e-09,1;UBERON:0000941,9.74e-09,1;UBERON:0001785,9.74e-09,1;UBERON:0002464,9.74e-09,1;UBERON:0004904,9.74e-09,1;UBERON:0001021,9.74e-09,1;UBERON:0003902,9.74e-09,1;UBERON:0005425,9.74e-09,1;UBERON:0001736,1.13e-08,1;UBERON:0006298,1.13e-08,1;UBERON:0002135,2.06e-08,1;UBERON:0010313,2.58e-07,10;UBERON:0002342,2.58e-07,10;UBERON:0005062,2.58e-07,10;UBERON:0002046,9.45e-07,5;UBERON:0004117,9.45e-07,5;UBERON:0007689,9.45e-07,5;UBERON:0007123,9.45e-07,5;UBERON:0003091,9.45e-07,5 | |||
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|short_description=p3@ITGA9 | |short_description=p3@ITGA9 | ||
}} | }} |
Latest revision as of 02:34, 18 September 2015
Short description: | p3@ITGA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGA9_5end |
Coexpression cluster: | C4327_Mast_heart_spleen_aorta_penis_thyroid_CD34 |
Association with transcript: | 65bp_to_ENST00000264741_5end |
EntrezGene: | ITGA9 |
HGNC: | 6145 |
UniProt: | Q13797 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.08e-14 | 5 |
basophil mast progenitor cell | 1.08e-14 | 5 |
endocrine cell | 2.24e-08 | 9 |