FFCP PHASE1:Hg19::chr6:32191834..32191863,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32191834..32191863,-
|short_description=p1@NOTCH4
|description=CAGE_peak_1_at_NOTCH4_5end
|association_with_transcript=0bp_to_ENST00000375023,ENST000004735...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4855 | |EntrezGene=4855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7884 | |HGNC=7884 | ||
|TSSclassifier=strong | |||
|UniProt=Q99466,Q6P3V5 | |UniProt=Q99466,Q6P3V5 | ||
|association_with_transcript=0bp_to_ENST00000375023,ENST00000473562,NM_004557,uc003obb.2,uc003obc.2,uc011dpu.1,uc011dpv.1_5end | |||
|cluster_id=chr6:32191834..32191863,- | |||
|coexpression_cluster_id=C2447 | |||
|description=CAGE_peak_1_at_NOTCH4_5end | |||
|id=chr6:32191834..32191863,- | |||
|ontology_enrichment_celltype=CL:0002139!8.30e-21!24;CL:0000115!3.44e-20!35;CL:0000071!2.67e-16!18;CL:0002546!2.67e-16!18;CL:0002078!3.14e-16!44;CL:1000413!5.44e-09!9;CL:0000213!5.46e-09!57;CL:0000215!5.46e-09!57;CL:0002543!4.28e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.02e-26;24!CL:0000115;8.70e-23;36!CL:0000071;7.33e-21;18!CL:0002078;2.33e-13;45!CL:1000413;2.89e-11;9!CL:0002543;8.23e-09;6!CL:0000213;1.91e-08;58!CL:0000215;1.91e-08;58!CL:0002544;7.24e-08;6!CL:0002138;2.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.07e-27,24;CL:0000115,1.16e-26,36;CL:0000071,7.39e-21,18;CL:0002546,7.39e-21,18;CL:0002078,2.95e-20,45;CL:0000213,1.85e-12,58;CL:0000215,1.85e-12,58;CL:1000413,2.76e-11,9;CL:0002543,8.24e-09,6;CL:0002544,6.82e-08,6;CL:0005020,1.84e-07,6;CL:0002138,1.84e-07,6;CL:0005022,1.84e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.33e-21;18!UBERON:0006601;6.65e-10;82!CL:0005022;2.08e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-63!115;UBERON:0004111!1.59e-27!241;UBERON:0001049!1.20e-26!57;UBERON:0005068!1.20e-26!57;UBERON:0006241!1.20e-26!57;UBERON:0007135!1.20e-26!57;UBERON:0000025!3.72e-24!194;UBERON:0000477!1.85e-22!286;UBERON:0003080!5.07e-22!42;UBERON:0002616!4.01e-21!59;UBERON:0002780!4.02e-21!41;UBERON:0001890!4.02e-21!41;UBERON:0006240!4.02e-21!41;UBERON:0001017!1.37e-20!82;UBERON:0005743!1.87e-20!86;UBERON:0003075!4.13e-20!86;UBERON:0007284!4.13e-20!86;UBERON:0002346!6.21e-19!90;UBERON:0000955!9.16e-19!69;UBERON:0006238!9.16e-19!69;UBERON:0000073!2.59e-18!94;UBERON:0001016!2.59e-18!94;UBERON:0002020!1.45e-17!34;UBERON:0003528!1.45e-17!34;UBERON:0001893!2.75e-17!34;UBERON:0000119!5.11e-17!312;UBERON:0000483!9.30e-17!309;UBERON:0002791!9.36e-17!33;UBERON:0001986!2.67e-16!18;UBERON:0004638!2.67e-16!18;UBERON:0004852!2.67e-16!18;UBERON:0001869!4.68e-16!32;UBERON:0002619!5.65e-14!22;UBERON:0003056!6.02e-14!61;UBERON:0000468!3.47e-13!659;UBERON:0000487!4.05e-13!22;UBERON:0001950!7.51e-13!20;UBERON:0000467!2.44e-12!625;UBERON:0000956!2.49e-12!25;UBERON:0000203!2.49e-12!25;UBERON:0000480!3.24e-12!626;UBERON:0000153!8.11e-12!129;UBERON:0007811!8.11e-12!129;UBERON:0006914!1.21e-11!25;UBERON:0000033!7.42e-11!123;UBERON:0000922!2.22e-10!612;UBERON:0000064!1.26e-09!219;UBERON:0002050!2.61e-09!605;UBERON:0005423!2.61e-09!605;UBERON:0004121!3.81e-09!169;UBERON:0003915!5.44e-09!9;UBERON:0004700!5.44e-09!9;UBERON:0001917!5.44e-09!9;UBERON:0000923!5.64e-09!604;UBERON:0005291!5.64e-09!604;UBERON:0006598!5.64e-09!604;UBERON:0002532!5.64e-09!604;UBERON:0000924!8.68e-09!173;UBERON:0006601!8.68e-09!173;UBERON:0000481!1.12e-08!347;UBERON:0000055!6.52e-08!69;UBERON:0003103!2.21e-07!69;UBERON:0002298!5.38e-07!8;UBERON:0002308!8.25e-07!9;UBERON:0000125!8.25e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.33e-21;18!UBERON:0001986;7.33e-21;18!UBERON:0004852;7.33e-21;18!UBERON:0007023;7.32e-19;114!UBERON:0002780;1.07e-18;41!UBERON:0001890;1.07e-18;41!UBERON:0003528;3.86e-17;34!UBERON:0002020;3.86e-17;34!UBERON:0001893;5.34e-17;34!UBERON:0002791;6.64e-17;32!UBERON:0000073;6.76e-17;53!UBERON:0002616;6.76e-17;53!UBERON:0001869;9.71e-17;32!UBERON:0002619;2.05e-16;22!UBERON:0000487;7.05e-16;22!UBERON:0001950;6.35e-15;20!UBERON:0000956;9.26e-14;25!UBERON:0000203;9.26e-14;25!UBERON:0006914;3.21e-13;25!UBERON:0003915;2.89e-11;9!UBERON:0004700;2.89e-11;9!UBERON:0001917;2.89e-11;9!UBERON:0001017;1.22e-10;75!UBERON:0000955;1.85e-10;68!UBERON:0001016;1.21e-09;83!UBERON:0000490;7.76e-09;33!UBERON:0000125;1.86e-08;9!UBERON:0002308;1.86e-08;9!UBERON:0001638;3.30e-07;9!UBERON:0003920;3.30e-07;9!UBERON:0004582;3.30e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.02e-73,114;UBERON:0001049,1.09e-31,56;UBERON:0005068,1.09e-31,56;UBERON:0006241,1.09e-31,56;UBERON:0007135,1.09e-31,56;UBERON:0004111,2.36e-29,240;UBERON:0000073,3.23e-29,53;UBERON:0002616,3.23e-29,53;UBERON:0000025,6.87e-27,192;UBERON:0002780,4.78e-25,41;UBERON:0001890,4.78e-25,41;UBERON:0003080,4.78e-25,41;UBERON:0006240,4.78e-25,41;UBERON:0003075,3.44e-24,82;UBERON:0007284,3.44e-24,82;UBERON:0001017,5.85e-23,81;UBERON:0000955,1.38e-22,68;UBERON:0006238,1.38e-22,68;UBERON:0002346,2.79e-22,86;UBERON:0001016,4.22e-21,89;UBERON:0004638,7.39e-21,18;UBERON:0001986,7.39e-21,18;UBERON:0004852,7.39e-21,18;UBERON:0003528,2.02e-20,34;UBERON:0002020,2.02e-20,34;UBERON:0001893,4.51e-20,34;UBERON:0002791,1.04e-18,32;UBERON:0001869,1.73e-18,32;UBERON:0010314,9.01e-18,132;UBERON:0010371,1.49e-16,104;UBERON:0003056,1.79e-16,61;UBERON:0002619,2.48e-16,22;UBERON:0000487,7.10e-16,22;UBERON:0011216,5.36e-15,223;UBERON:0000483,6.92e-15,306;UBERON:0001950,7.22e-15,20;UBERON:0000119,1.84e-14,309;UBERON:0000956,1.09e-13,25;UBERON:0000203,1.09e-13,25;UBERON:0006914,3.23e-13,25;UBERON:0003915,2.76e-11,9;UBERON:0004700,2.76e-11,9;UBERON:0001917,2.76e-11,9;UBERON:0004121,6.22e-10,171;UBERON:0000924,6.22e-10,171;UBERON:0006601,6.22e-10,171;UBERON:0000055,8.01e-10,68;UBERON:0002050,1.27e-09,564;UBERON:0005423,1.55e-09,581;UBERON:0000922,1.57e-09,592;UBERON:0000923,1.69e-09,560;UBERON:0010316,1.69e-09,560;UBERON:0005291,1.69e-09,560;UBERON:0006598,1.69e-09,560;UBERON:0010317,1.69e-09,560;UBERON:0002532,1.69e-09,560;UBERON:0000125,1.94e-08,9;UBERON:0002308,1.94e-08,9;UBERON:0003076,7.75e-08,15;UBERON:0003057,7.75e-08,15;UBERON:0002049,2.09e-07,78;UBERON:0007798,2.09e-07,78;UBERON:0004872,2.37e-07,83;UBERON:0007500,3.23e-07,59;UBERON:0001981,3.23e-07,59;UBERON:0004537,3.23e-07,59;UBERON:0006965,3.23e-07,59;UBERON:0001638,3.38e-07,9;UBERON:0003920,3.38e-07,9;UBERON:0004582,3.38e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,0,0,0,0,0,0,0,0,12.0500749457896,0,0,0,0,0,20.2717030659541,35.4636844683679,27.1163975970582,13.5158437009359,16.3444573070164,48.9468107266708,5.6530794192401,15.5214791397665,47.0451851717515,21.1084916202179,38.7625138753993,28.1055347522501,68.6177256167574,7.25092770796465,10.6438094800592,10.4946684745713,15.8095124548724,53.4693685601961,30.3619076165871,50.9681675861405,33.1077752620967,30.6633274931766,37.021360723157,21.8010075277185,0,0,0.872188104285069,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,1.34710672069688,0.980771418680752,0,0,0,0,2.85235910772225,0.149448680551801,0,0.161872944368132,0.561803226808994,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.0524363699719,19.6338483324824,0,0,0,2.94848165003288,39.5829237476541,0,0,0,0,0,0,0.277765335475589,0,0,2.88662684050547,0,0.117408694235822,7.65142173133691,10.648666789262,3.99533719692656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.560655421726804,0,0.07333828582095,0,3.57656445851882,3.381211010224,0,0,0,0,0,0,0,0.823240336780769,3.58309802723109,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,101.222711823098,68.3776695211593,25.4780781000524,146.515890055775,0.270946437543853,0,0.254876273045038,1.66215201785745,0,0,0.261435451024901,0.256450125116389,0,0,20.1960382829536,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.435050081742686,0,0,0.495854746082934,1.72971060628596,6.76347376221296,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0.577332676353072,0,0,22.3120807840967,0,3.36942951335251,0.443430153536676,2.06751060186264,0,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.0888595519195,0,0.780103689942349,0,0,0.296964680832639,0,0.994147647766298,10.5502062307885,0,0,0,6.17668763578316,5.52567831062295,0,0,0,0,0,0,0,9.37112353550869,0,2.22273980289274,4.84666373047609,3.9890282209596,7.98455192004777,0,0,48.5749715541312,0,0,0,0,0,0,2.65722415744152,10.4918901604105,1.52581736317083,8.0722859749794,1.47773809476774,3.07139556015562,0,0,10.234384381005,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,15.391616223581,3.66618086960175,0,0,0,4.9876838405701,35.3134164811467,2.81117334870407,0,0,0,10.2591944740842,13.308978765353,4.28501866282686,9.35161378501622,0,0,0,0,0,0,0.284609546029793,0,0,0,0,12.4055934451841,0,0,0,0,8.92298951693459,0,6.77942222341597,0.411125773940253,0.993573058514948,4.7483096966909,0,0.400794101257669,9.39193176853151,0,0,0,0,0,0.124252535565433,0,0,0,0,0,2.40168115483916,16.8393616037151,0,0,0,19.2704856877855,37.5823095379161,64.6085722119133,14.9759250374243,29.6165973214234,26.5574034355828,30.5684799814604,0,0,0,0,0,0,0,3.18091875923721,11.7134929255955,0.321506296930038,0,0,0,0,5.1637123159321,0,11.8208560948797,19.2508338455443,0,0,0,8.5763439164804,16.5522992591358,0,0,0,0,0,0,0,0.339936274560377,11.7241786942466,9.27548222385549,7.88626033805458,14.1488883864678,0,0,48.5882727183011,71.2135502101487,38.5242321472892,1.9846640872478,0,0,0,25.5688367583653,54.9010867909713,13.7855509543558,13.442777859102,0,2.65820453990096,2.19647276823534,16.9007756453775,3.44045517414043,11.2038342052221,10.8668705147421,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.784158019835,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,1.67593475391973,0,0,0,0,0,5.52371335829552,8.5017945795351,21.5505709727154,2.2562800066483,1.51243017733031,3.8728061379962,5.65164759711479,14.2769420259154,0,0,0,0,0,0,0,7.52103283492572,0.60511520611056,2.34454203369928,0,0,0,5.47054435408997,5.46754669029693,13.8480153655793,6.65866007036022,3.28184885410932,1.64477330057155,12.4052794597324,0,0.255524855279191,3.21421101526972,8.4070930554706,3.64179362541979,9.5618120367545,9.31374886707708,0,0.1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| ||
|short_description=p1@NOTCH4 | |||
}} | }} |
Latest revision as of 02:34, 18 September 2015
Short description: | p1@NOTCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOTCH4_5end |
Coexpression cluster: | C2447_Renal_lung_Endothelial_adipose_heart_Hepatic_mature |
Association with transcript: | 0bp_to_ENST00000375023, ENST00000473562, NM_004557, uc003obb.2, uc003obc.2, uc011dpu.1, uc011dpv.1_5end |
EntrezGene: | NOTCH4 |
HGNC: | 7884 |
UniProt: | Q99466Q6P3V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.07e-27 | 24 |
endothelial cell | 1.16e-26 | 36 |
blood vessel endothelial cell | 7.39e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.39e-21 | 18 |
meso-epithelial cell | 2.95e-20 | 45 |
lining cell | 1.85e-12 | 58 |
barrier cell | 1.85e-12 | 58 |
endothelial cell of artery | 2.76e-11 | 9 |
vein endothelial cell | 8.24e-09 | 6 |
aortic endothelial cell | 6.82e-08 | 6 |
lymphangioblast | 1.84e-07 | 6 |
endothelial cell of lymphatic vessel | 1.84e-07 | 6 |
vascular lymphangioblast | 1.84e-07 | 6 |