FFCP PHASE1:Hg19::chr19:41116064..41116139,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8425 | |EntrezGene=8425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |HGNC=6717 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8L2 | |UniProt=B7Z8L2 | ||
|association_with_transcript=0bp_to_ENST00000546155,uc010xvo.1_5end | |association_with_transcript=0bp_to_ENST00000546155,uc010xvo.1_5end | ||
|cluster_id=chr19:41116064..41116139,+ | |||
|description=CAGE_peak_3_at_LTBP4_5end | |description=CAGE_peak_3_at_LTBP4_5end | ||
|id=chr19:41116064..41116139,+ | |id=chr19:41116064..41116139,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.58e-08!18;CL:0000789!3.58e-08!18;CL:0002420!3.58e-08!18;CL:0002419!3.58e-08!18;CL:0000790!3.58e-08!18;CL:0002076!2.10e-07!43 | |ontology_enrichment_celltype=CL:0000791!3.58e-08!18;CL:0000789!3.58e-08!18;CL:0002420!3.58e-08!18;CL:0002419!3.58e-08!18;CL:0000790!3.58e-08!18;CL:0002076!2.10e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.46e-08;18!CL:0000789;1.46e-08;18!CL:0002419;1.46e-08;18!CL:0002076;9.72e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-08,18;CL:0000789,1.21e-08,18;CL:0002420,1.21e-08,18;CL:0002419,1.21e-08,18;CL:0000790,1.21e-08,18;CL:0002076,3.05e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.46e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.66e-08!95;UBERON:0000165!1.30e-07!28;UBERON:0000930!1.30e-07!28;UBERON:0001444!1.76e-07!48;UBERON:0002097!1.97e-07!40 | |ontology_enrichment_uberon=UBERON:0003102!2.66e-08!95;UBERON:0000165!1.30e-07!28;UBERON:0000930!1.30e-07!28;UBERON:0001444!1.76e-07!48;UBERON:0002097!1.97e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.62e-08;28!UBERON:0000161;4.77e-07;19!UBERON:0000166;4.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.43e-10,99;UBERON:0001444,2.61e-08,49;UBERON:0002097,4.06e-08,41;UBERON:0000153,7.37e-08,62;UBERON:0007811,7.37e-08,62;UBERON:0000033,1.14e-07,56;UBERON:0000165,2.90e-07,29;UBERON:0000930,2.90e-07,29 | |||
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| ||
|short_description=p3@LTBP4 | |short_description=p3@LTBP4 | ||
}} | }} |
Latest revision as of 02:32, 18 September 2015
Short description: | p3@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LTBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546155, uc010xvo.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | B7Z8L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.21e-08 | 18 |
alpha-beta T cell | 1.21e-08 | 18 |
immature T cell | 1.21e-08 | 18 |
mature T cell | 1.21e-08 | 18 |
immature alpha-beta T cell | 1.21e-08 | 18 |
endo-epithelial cell | 3.05e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.43e-10 | 99 |
subdivision of head | 2.61e-08 | 49 |
skin of body | 4.06e-08 | 41 |
anterior region of body | 7.37e-08 | 62 |
craniocervical region | 7.37e-08 | 62 |
head | 1.14e-07 | 56 |
mouth | 2.90e-07 | 29 |
stomodeum | 2.90e-07 | 29 |