FFCP PHASE1:Hg19::chr21:32931362..32931384,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:32931362..32931384,-
|short_description=p2@TIAM1
|description=CAGE_peak_2_at_TIAM1_5end
|association_with_transcript=-72bp_to_ENST00000286827,ENST00000399...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7074 | |EntrezGene=7074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11805 | |HGNC=11805 | ||
|TSSclassifier=strong | |||
|UniProt=Q13009,E9PD83 | |UniProt=Q13009,E9PD83 | ||
|association_with_transcript=-72bp_to_ENST00000286827,ENST00000399841,NM_003253,uc002yow.1_5end | |||
|cluster_id=chr21:32931362..32931384,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_TIAM1_5end | |||
|id=chr21:32931362..32931384,- | |||
|ontology_enrichment_celltype=CL:0002319!1.56e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.27e-07;25!CL:0000039;2.23e-07;7!CL:0000586;2.23e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.18e-07,25;CL:0000039,3.17e-07,7;CL:0000586,3.17e-07,7;CL:0000133,4.65e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.06e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.55e-08;22!DOID:2994;1.55e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.95e-08,22;DOID:2994,1.95e-08,22;DOID:0050687,9.31e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.90e-39!94;UBERON:0001016!7.90e-39!94;UBERON:0005743!1.08e-37!86;UBERON:0001017!2.30e-36!82;UBERON:0000955!4.85e-31!69;UBERON:0006238!4.85e-31!69;UBERON:0001049!2.00e-29!57;UBERON:0005068!2.00e-29!57;UBERON:0006241!2.00e-29!57;UBERON:0007135!2.00e-29!57;UBERON:0002616!4.00e-27!59;UBERON:0003075!8.04e-27!86;UBERON:0007284!8.04e-27!86;UBERON:0002346!1.12e-26!90;UBERON:0000924!3.36e-26!173;UBERON:0006601!3.36e-26!173;UBERON:0004121!5.47e-26!169;UBERON:0000153!1.63e-23!129;UBERON:0007811!1.63e-23!129;UBERON:0002780!4.69e-23!41;UBERON:0001890!4.69e-23!41;UBERON:0006240!4.69e-23!41;UBERON:0000033!4.15e-22!123;UBERON:0003080!5.85e-22!42;UBERON:0001893!1.08e-21!34;UBERON:0003056!2.31e-21!61;UBERON:0002020!2.99e-21!34;UBERON:0003528!2.99e-21!34;UBERON:0002791!4.73e-21!33;UBERON:0001869!8.05e-21!32;UBERON:0000956!3.00e-16!25;UBERON:0000203!3.00e-16!25;UBERON:0002619!3.98e-15!22;UBERON:0007023!5.51e-15!115;UBERON:0001950!4.62e-14!20;UBERON:0000064!7.38e-09!219;UBERON:0003076!1.42e-08!15;UBERON:0003057!1.42e-08!15;UBERON:0004732!1.28e-07!13;UBERON:0004733!3.42e-07!12;UBERON:0002028!3.42e-07!12;UBERON:0007277!3.42e-07!12;UBERON:0002420!4.65e-07!9;UBERON:0007245!4.65e-07!9;UBERON:0010009!4.65e-07!9;UBERON:0010011!4.65e-07!9;UBERON:0000454!4.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.35e-26;32!UBERON:0001893;1.52e-25;34!UBERON:0002791;1.70e-25;32!UBERON:0003528;4.81e-25;34!UBERON:0002020;4.81e-25;34!UBERON:0000956;5.53e-22;25!UBERON:0000203;5.53e-22;25!UBERON:0002780;7.01e-22;41!UBERON:0001890;7.01e-22;41!UBERON:0000073;3.02e-21;53!UBERON:0002616;3.02e-21;53!UBERON:0002619;1.70e-20;22!UBERON:0001950;5.14e-19;20!UBERON:0000955;3.70e-18;68!UBERON:0001017;8.30e-18;75!UBERON:0001016;5.25e-17;83!UBERON:0000922;1.51e-14;49!UBERON:0004732;4.21e-10;13!UBERON:0004733;1.82e-09;12!UBERON:0002028;1.82e-09;12!UBERON:0002420;3.37e-09;9!UBERON:0007245;3.37e-09;9!UBERON:0010009;3.37e-09;9!UBERON:0010011;3.37e-09;9!UBERON:0000454;3.37e-09;9!UBERON:0000125;2.33e-08;9!UBERON:0002308;2.33e-08;9!UBERON:0002680;1.83e-07;9!UBERON:0001895;1.83e-07;9!UBERON:0009663;2.31e-07;7!UBERON:0001871;5.71e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.69e-45,89;UBERON:0001017,2.22e-44,81;UBERON:0001049,6.77e-40,56;UBERON:0005068,6.77e-40,56;UBERON:0006241,6.77e-40,56;UBERON:0007135,6.77e-40,56;UBERON:0000955,5.63e-38,68;UBERON:0006238,5.63e-38,68;UBERON:0000073,8.25e-38,53;UBERON:0002616,8.25e-38,53;UBERON:0003075,1.48e-34,82;UBERON:0007284,1.48e-34,82;UBERON:0002346,6.54e-34,86;UBERON:0001893,1.10e-29,34;UBERON:0002780,1.84e-29,41;UBERON:0001890,1.84e-29,41;UBERON:0003080,1.84e-29,41;UBERON:0006240,1.84e-29,41;UBERON:0003528,4.60e-29,34;UBERON:0002020,4.60e-29,34;UBERON:0003056,6.24e-29,61;UBERON:0001869,1.84e-28,32;UBERON:0002791,5.45e-28,32;UBERON:0004121,1.45e-27,171;UBERON:0000924,1.45e-27,171;UBERON:0006601,1.45e-27,171;UBERON:0010371,9.76e-27,104;UBERON:0000956,4.59e-22,25;UBERON:0000203,4.59e-22,25;UBERON:0002619,1.70e-20,22;UBERON:0001950,5.24e-19,20;UBERON:0011216,8.73e-18,223;UBERON:0010314,1.66e-17,132;UBERON:0003076,2.37e-11,15;UBERON:0003057,2.37e-11,15;UBERON:0007023,3.83e-11,114;UBERON:0004732,5.07e-10,13;UBERON:0004733,1.99e-09,12;UBERON:0002028,1.99e-09,12;UBERON:0007277,1.99e-09,12;UBERON:0002420,3.06e-09,9;UBERON:0007245,3.06e-09,9;UBERON:0010009,3.06e-09,9;UBERON:0010011,3.06e-09,9;UBERON:0000454,3.06e-09,9;UBERON:0000125,2.10e-08,9;UBERON:0002308,2.10e-08,9;UBERON:0002680,1.78e-07,9;UBERON:0001895,1.78e-07,9;UBERON:0010092,1.78e-07,9;UBERON:0009663,2.20e-07,7;UBERON:0001871,5.77e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0,0,0,0,0,0,0,3.32426856807327,2.44800829493104,1.56727360739044,1.71741592278634,7.11747010378998,3.51519390865448,2.59805579543034,2.95562122019805,3.14843125254717,0,0,0,0,0,0,2.09161441566814,3.69640004467296,0.293600439334847,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.526768169550154,0.983548850569165,1.96505381374582,1.85041349099558,0.334372990781356,0.651844533267181,0.473447805734733,0,0.668462741311041,0,0.221533894583621,0.270803863765016,1.40900451698243,0.780356085359269,8.05745732558013,4.42160028457357,4.34704628602579,0.593146252648242,0.802622484269139,2.09071047609954,3.62589896632212,0,0,0.506039384039006,0.318565414324097,1.30216690771284,0,0.451725357233318,0.76791966692651,1.24930726552346,0.473554504088034,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0.670700859703636,0,0,0,0.144846518960824,0,0,6.23929793282848,3.32594096193846,3.07421749925941,4.6497571801688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.535798369704479,0.673588117878509,0.450445921933289,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0.490385709340376,1.05950199351452,2.88087962239999,0.70296429550139,0,0,0,0.939475989150119,0.647491777472526,0.98315564691574,0,1.10550885580591,0.103325781175765,0,0,0,0,0,0.625592599359821,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,9.27000166584925,5.56625026950238,6.27447291495399,9.64047811642945,5.04641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,2.36315962672562,15.4512084795128,0.122988438543114,1.20097467208968,0.768251997860379,0,0.301586917234893,1.11106134190236,0,0,0,4.75314660397815,0.234817388471643,0.144366447761074,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.704387472105808,0.414656231081544,0.576479813667846,0.12624243342638,1.58744735730423,1.14596527667483,2.34434894420094,0,1.43958489784653,0,0,2.13049060256185,0.87192013766656,1.98013371716565,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25046917581229,0,0.862510299438069,0.256686072559497,3.30323011489202,2.60279707715243,0.773288812777695,2.34522771468088,4.46557126157214,0.749007023947182,0,0,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0,0,0,1.32845119707087,0.368738337083406,0,4.50342662164303,0.686286847621712,0.206768026122887,0.647142602455851,0.426910231213777,2.12189300012382,1.66435439510497,1.81434175997808,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.895499018888713,0,0,3.07740150139667,2.29610251989794,0.650756789328606,0.412164046590889,2.7470839445503,5.03307949515587,0.574265537996172,0.650060246036521,0,0.096670718292122,0.462145851343933,0.614014698904518,0.413509717453592,0.214840489736547,0,1.19317278382541,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,1.51789269506286,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0.962479855263359,1.47024129588619,0,3.46246111143468,4.41079428760168,3.66680427276291,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0,0.403599414382095,0.425846237690326,0,0,0,0,0,0,0,0.811367035427949,0.33307196799782,0,6.17563783347125,0.293016358543788,4.73306034823102,0,9.94476513822446,0.23874448473769,2.67268212749375,0,8.94732882989668,14.0669416410513,1.00177834520615,0,11.1896466307837,0.996239941255349,0,5.54252045279407,1.32949287252801,0.492339221844278,0,0,0.179021174675609,0,0.0986434056369336,0,0,9.69332746095218,5.38054969338737,7.98455192004777,1.5625665665114,4.54791999980218,0,2.50345586228099,4.83081935556256,0,20.3398590212464,5.83209226766509,7.81312477199815,7.08593108651071,17.3658871620587,45.774520895125,90.6749931436042,83.6399761638539,5.92340572315726,0.544692317594951,2.09135616417905,0.461701551022782,0,4.38071418337314,8.25770328569904,2.06430006651815,0.957003479195758,0.457987967009312,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0.476809736941136,0.210998064528027,0.489698424477443,0.282706142867882,0,0.995261931078505,0.0884575645033392,0.611030144933625,2.07564790076435,2.84197059576957,1.56632924258183,6.470508766145,1.60515529459758,4.91955336023212,9.85255861764596,2.54364004611717,0.971121518136371,0,1.20990716048664,10.4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| ||
|short_description=p2@TIAM1 | |||
}} | }} |
Latest revision as of 02:31, 18 September 2015
Short description: | p2@TIAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIAM1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -72bp_to_ENST00000286827, ENST00000399841, NM_003253, uc002yow.1_5end |
EntrezGene: | TIAM1 |
HGNC: | 11805 |
UniProt: | Q13009E9PD83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.18e-07 | 25 |
germ line cell | 3.17e-07 | 7 |
germ cell | 3.17e-07 | 7 |
neurectodermal cell | 4.65e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.95e-08 | 22 |
germ cell cancer | 1.95e-08 | 22 |
cell type cancer | 9.31e-07 | 143 |