FFCP PHASE1:Hg19::chr19:41107249..41107295,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8425 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |||
|TSSclassifier=strong | |||
|UniProt=E7EUU1,B3KXY6,Q8N2S1 | |||
|association_with_transcript=0bp_to_ENST00000396819,NM_001042545,uc002ooi.1_5end | |||
|cluster_id=chr19:41107249..41107295,+ | |||
|coexpression_cluster_id=C3343 | |||
|description=CAGE_peak_1_at_LTBP4_5end | |||
|id=chr19:41107249..41107295,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-25!115;UBERON:0000477!8.70e-12!286;UBERON:0004119!5.23e-11!169;UBERON:0000925!5.23e-11!169;UBERON:0006595!5.23e-11!169;UBERON:0000481!1.18e-10!347;UBERON:0004111!2.37e-09!241;UBERON:0001007!3.25e-09!155;UBERON:0001555!3.25e-09!155;UBERON:0007026!3.25e-09!155;UBERON:0000483!4.16e-09!309;UBERON:0000119!1.20e-08!312;UBERON:0004921!1.44e-08!129;UBERON:0004185!1.44e-08!129;UBERON:0000161!4.07e-08!35;UBERON:0000924!9.02e-08!173;UBERON:0006601!9.02e-08!173;UBERON:0000153!1.27e-07!129;UBERON:0007811!1.27e-07!129;UBERON:0004121!3.16e-07!169;UBERON:0000064!5.63e-07!219;UBERON:0000468!6.01e-07!659;UBERON:0000033!7.10e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.13e-08;33!UBERON:0007023;6.46e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-25,114;UBERON:0011216,1.33e-14,223;UBERON:0004119,4.08e-14,160;UBERON:0000925,4.08e-14,160;UBERON:0006595,4.08e-14,160;UBERON:0001007,1.05e-11,145;UBERON:0001555,1.05e-11,145;UBERON:0007026,1.05e-11,145;UBERON:0004921,2.31e-11,118;UBERON:0004121,1.47e-08,171;UBERON:0000924,1.47e-08,171;UBERON:0006601,1.47e-08,171;UBERON:0002050,1.66e-08,564;UBERON:0004111,2.63e-08,240;UBERON:0000161,2.73e-08,36;UBERON:0000483,4.17e-08,306;UBERON:0000923,5.79e-08,560;UBERON:0010316,5.79e-08,560;UBERON:0005291,5.79e-08,560;UBERON:0006598,5.79e-08,560;UBERON:0010317,5.79e-08,560;UBERON:0002532,5.79e-08,560;UBERON:0000119,1.44e-07,309;UBERON:0001004,2.87e-07,74 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.26858963686374,3.00219895059391,5.36353313312745,6.10636966870258,0,4.42203911398782,4.44015567939725,0.737201809504527,0.697801167972428,0,1.31883489114227,2.10402800032079,7.29074226601415,0,1.20538905604795,2.92124036154949,1.46379839637152,0.123121058076788,0.408001382488506,1.25381888591235,0.85870796139317,0.273748850145768,2.00868223351684,0,0,0,0.393364276848904,0,6.65709330259127,3.67768489791571,3.31326510656075,8.13458822366933,1.62681121218633,0,2.34880351467878,0,1.00272223735071,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,25.4267791106015,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0.560508562981536,5.00429761072646,0.196709770113833,1.96505381374582,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,1.28091319725675,1.56071217071854,0,0,0,0,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,2.46338399076314,0.80642697289893,2.13952156626806,1.30341963494519,12.1903433156981,2.01210257911091,4.85877735005415,6.50590474292219,11.0294340339896,8.11140506180613,3.1811437882044,13.6257763684738,0.472674085820339,0.886917589850256,0.966182642624386,89.786156253682,13.1146303785315,5.93255108455087,0,0,0,0.238490624305342,0,0,0.596287222100115,1.72046919021225,3.12426451446835,5.6530794192401,6.71199097935849,4.95212475492121,1.04497483268405,0,0,1.33888245105868,3.22263453687318,6.0821768457481,21.2333990066907,0.735326160691737,14.5825550618717,0.17859945656816,0.44905874525234,0.563057402416611,3.06633274931766,1.89853131913626,0.916008719652036,0,0,12.6467275121335,1.98788780678127,3.16576279161449,5.56118559415519,24.3811127636492,3.54668382198357,3.36406560085384,3.20246987189115,3.45334567784024,4.04574346019696,2.96363478553314,2.45192854670188,5.60022482286246,5.76175924479999,2.34321431833797,2.80944069147288,1.1409436430889,5.97794722207204,0.23486899728753,0.485618833104395,0.140450806702248,0.61246251376468,1.96534907698829,5.88956952701863,19.0080457165129,14.5887488274349,1.82032272387605,4.31170885089743,0.336672227908132,0.625592599359821,1.10825646193673,0,1.22595118319608,12.0190447125277,3.17610112848059,0.179389635688862,1.49490172172997,1.48352330811693,1.20036438433761,1.13357782162283,0.515281080091258,1.48893485065272,0.168776332241266,0,1.51460264546469,2.02509777013059,50.7568618411069,0.710019185033229,0.201504196455281,0.169560592310488,1.15956511897978,1.63647672354501,1.14721838155602,0.121973706129595,0.132529768321485,0.116193942869518,0.518305275076852,0.252320850875628,1.45990943630332,0,0.643240938192885,0,1.85747171212792,2.16563844500876,2.48444280083672,2.02301628093722,3.85617647813571,2.86764329104224,1.96091499683166,3.79632990577755,2.15730093056263,3.13954344200554,2.69323009862473,0,0,12.7587943512734,35.2820907325301,0,0.982827216677626,18.3144871071235,0,2.33678033231916,1.71567810298526,7.57276969319516,2.24803506515239,2.71428225511403,5.92566049014589,4.23550796903422,5.19967392639789,0,1.15930404975077,2.11335649624479,10.1056513432752,4.62985512576611,6.27838702374174,0.790204397959275,0.858486162094873,0,0,0,2.81201501960331,4.19955320497149,2.1266264586358,2.68675568108545,1.74380363108377,4.60059214998253,0.492663237895943,0.44024217006613,12.4396869324463,7.92659743793288,22.597395583322,5.27032522625003,8.78573378784039,7.03304683260282,17.1072446022705,2.46785982487976,10.5120070245371,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,1.03417372606222,35.7656445851882,0.845302752556,7.97814349754611,3.12022310734098,0,0,0,17.0143812453196,6.51145926469732,0,0.325736184293735,12.7941101547316,0,0.301439377059586,0.871533458600294,2.29937879718731,0,0,0,2.63587341040741,11.4861935834114,0,0,0.410952645100767,0.179060963239896,1.79336230389644,0.788123040807709,6.03757209606648,1.79680250791648,1.01637849688985,2.60279707715243,0,0.837581326671744,0.637938751653163,0,0,0.414415513436035,11.2876172381609,3.50119364741774,3.25518028439683,1.66376689224646,0.892144943985809,1.10391690523754,13.9398283841329,8.12554469264841,2.27407504055985,16.5556914068008,0.664225598535437,1.29058417979192,8.51459421787212,8.02784745597236,6.86286847621712,0.413536052245775,0,0.853820462427555,0,1.66435439510497,0.604780586659361,0,0.153461973288062,0.280660094433074,0.768834895534206,2.04682899626681,5.95159508231348,1.48418066444991,0.462629081407967,0.177561725313127,0.492762936082855,1.55776328755086,0.116210378459959,4.71351853407327,2.6065841139427,19.7053316322818,15.7295793985511,27.8599487050277,83.5262523291532,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,4.62681758070868,1.08378575017541,5.51858751240339,0.254876273045038,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| |||
|short_description=p1@LTBP4 | |||
}} |
Latest revision as of 02:29, 18 September 2015
Short description: | p1@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTBP4_5end |
Coexpression cluster: | C3343_heart_aorta_cervix_prostate_penis_rectum_smooth |
Association with transcript: | 0bp_to_ENST00000396819, NM_001042545, uc002ooi.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | E7EUU1B3KXY6Q8N2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.46e-25 | 114 |
organ system subdivision | 1.33e-14 | 223 |
endoderm-derived structure | 4.08e-14 | 160 |
endoderm | 4.08e-14 | 160 |
presumptive endoderm | 4.08e-14 | 160 |
digestive system | 1.05e-11 | 145 |
digestive tract | 1.05e-11 | 145 |
primitive gut | 1.05e-11 | 145 |
subdivision of digestive tract | 2.31e-11 | 118 |
ectoderm-derived structure | 1.47e-08 | 171 |
ectoderm | 1.47e-08 | 171 |
presumptive ectoderm | 1.47e-08 | 171 |
embryonic structure | 1.66e-08 | 564 |
anatomical conduit | 2.63e-08 | 240 |
orifice | 2.73e-08 | 36 |
epithelium | 4.17e-08 | 306 |
germ layer | 5.79e-08 | 560 |
germ layer / neural crest | 5.79e-08 | 560 |
embryonic tissue | 5.79e-08 | 560 |
presumptive structure | 5.79e-08 | 560 |
germ layer / neural crest derived structure | 5.79e-08 | 560 |
epiblast (generic) | 5.79e-08 | 560 |
cell layer | 1.44e-07 | 309 |
respiratory system | 2.87e-07 | 74 |