FFCP PHASE1:Hg19::chr13:80055508..80055575,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:80055508..80055575,+ to FFCP PHASE1:Hg19::chr13:80055508..80055575,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000487865_5end | |||
|cluster_id=chr13:80055508..80055575,+ | |||
|description=CAGE_peak_2_at_NDFIP2_5end | |||
|id=chr13:80055508..80055575,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.78e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.92e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.63e-13!347;UBERON:0000475!8.44e-12!365;UBERON:0000064!3.41e-10!219;UBERON:0002619!4.47e-09!22;UBERON:0004119!6.11e-09!169;UBERON:0000925!6.11e-09!169;UBERON:0006595!6.11e-09!169;UBERON:0001950!1.15e-08!20;UBERON:0001007!1.20e-08!155;UBERON:0001555!1.20e-08!155;UBERON:0007026!1.20e-08!155;UBERON:0001869!1.44e-08!32;UBERON:0000153!1.49e-08!129;UBERON:0007811!1.49e-08!129;UBERON:0001893!4.22e-08!34;UBERON:0000033!5.77e-08!123;UBERON:0000477!7.09e-08!286;UBERON:0004121!1.20e-07!169;UBERON:0002791!1.33e-07!33;UBERON:0002020!1.76e-07!34;UBERON:0003528!1.76e-07!34;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0000956!3.36e-07!25;UBERON:0000203!3.36e-07!25;UBERON:0000924!3.44e-07!173;UBERON:0006601!3.44e-07!173;UBERON:0002780!3.49e-07!41;UBERON:0001890!3.49e-07!41;UBERON:0006240!3.49e-07!41;UBERON:0003080!4.00e-07!42;UBERON:0003104!8.61e-07!238;UBERON:0009142!8.61e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.65e-09;22!UBERON:0001950;1.03e-08;20!UBERON:0001869;5.86e-08;32!UBERON:0000956;2.52e-07;25!UBERON:0000203;2.52e-07;25!UBERON:0001893;2.74e-07;34!UBERON:0002791;3.34e-07;32!UBERON:0003528;7.20e-07;34!UBERON:0002020;7.20e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,7.50e-13,223;UBERON:0002619,4.41e-09,22;UBERON:0001950,1.13e-08,20;UBERON:0001869,1.43e-08,32;UBERON:0004119,2.44e-08,160;UBERON:0000925,2.44e-08,160;UBERON:0006595,2.44e-08,160;UBERON:0001007,2.86e-08,145;UBERON:0001555,2.86e-08,145;UBERON:0007026,2.86e-08,145;UBERON:0001893,4.17e-08,34;UBERON:0004121,5.28e-08,171;UBERON:0000924,5.28e-08,171;UBERON:0006601,5.28e-08,171;UBERON:0002791,8.56e-08,32;UBERON:0003528,1.75e-07,34;UBERON:0002020,1.75e-07,34;UBERON:0000956,3.33e-07,25;UBERON:0000203,3.33e-07,25;UBERON:0002780,3.46e-07,41;UBERON:0001890,3.46e-07,41;UBERON:0003080,3.46e-07,41;UBERON:0006240,3.46e-07,41;UBERON:0004921,5.66e-07,118 | |||
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| ||
|short_description=p2@NDFIP2 | |||
}} | }} |
Latest revision as of 02:29, 18 September 2015
Short description: | p2@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.92e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 7.50e-13 | 223 |
regional part of cerebral cortex | 4.41e-09 | 22 |
neocortex | 1.13e-08 | 20 |
cerebral hemisphere | 1.43e-08 | 32 |
endoderm-derived structure | 2.44e-08 | 160 |
endoderm | 2.44e-08 | 160 |
presumptive endoderm | 2.44e-08 | 160 |
digestive system | 2.86e-08 | 145 |
digestive tract | 2.86e-08 | 145 |
primitive gut | 2.86e-08 | 145 |
telencephalon | 4.17e-08 | 34 |
ectoderm-derived structure | 5.28e-08 | 171 |
ectoderm | 5.28e-08 | 171 |
presumptive ectoderm | 5.28e-08 | 171 |
regional part of telencephalon | 8.56e-08 | 32 |
brain grey matter | 1.75e-07 | 34 |
gray matter | 1.75e-07 | 34 |
cerebral cortex | 3.33e-07 | 25 |
pallium | 3.33e-07 | 25 |
regional part of forebrain | 3.46e-07 | 41 |
forebrain | 3.46e-07 | 41 |
anterior neural tube | 3.46e-07 | 41 |
future forebrain | 3.46e-07 | 41 |
subdivision of digestive tract | 5.66e-07 | 118 |