FFCP PHASE1:Hg19::chr13:80055312..80055319,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:80055312..80055319,+ to FFCP PHASE1:Hg19::chr13:80055312..80055319,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NV92 | |UniProt=Q9NV92 | ||
|association_with_transcript=25bp_to_ENST00000218652_5end | |||
|cluster_id=chr13:80055312..80055319,+ | |||
|description=CAGE_peak_10_at_NDFIP2_5end | |||
|id=chr13:80055312..80055319,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.63e-14!43;CL:0002251!9.90e-12!21;CL:0000223!1.17e-10!59;CL:0000066!2.73e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.66e-17;20!CL:0002541;6.56e-15;3!CL:0000575;3.02e-10;2!CL:0000622;3.90e-09;5!CL:0002076;4.24e-09;42!CL:0002159;4.53e-08;14!CL:0000154;1.11e-07;6!CL:0002623;2.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.91e-17,20;CL:0002541,1.55e-14,3;CL:0002076,1.22e-13,42;CL:0000575,2.90e-10,2;CL:0000223,3.29e-09,58;CL:0000622,4.27e-09,5;CL:0000076,1.67e-08,63;CL:0002159,3.10e-08,14;CL:0000154,1.19e-07,6;CL:0000066,1.45e-07,253;CL:0002623,3.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.39e-12!106;DOID:1749!6.63e-10!14;DOID:0050687!6.77e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.46e-16;14!DOID:4468;1.19e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.96e-16,14;DOID:4468,1.29e-10,2;DOID:305,5.86e-08,106;DOID:0050687,8.70e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.93e-11!169;UBERON:0000925!1.93e-11!169;UBERON:0006595!1.93e-11!169;UBERON:0001007!2.66e-09!155;UBERON:0001555!2.66e-09!155;UBERON:0007026!2.66e-09!155;UBERON:0001004!2.92e-09!72;UBERON:0004921!1.15e-08!129;UBERON:0004185!1.15e-08!129;UBERON:0000166!1.72e-08!21;UBERON:0000064!2.55e-08!219;UBERON:0000062!8.63e-08!511;UBERON:0000161!9.80e-08!35;UBERON:0000344!3.31e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.71e-19;4!UBERON:0004785;3.71e-19;4!UBERON:0003124;6.56e-15;3!UBERON:0000920;6.56e-15;3!UBERON:0000974;8.05e-13;6!UBERON:0000161;1.89e-08;19!UBERON:0000166;1.89e-08;19!UBERON:0005631;1.01e-07;10!UBERON:0000158;1.01e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.64e-19,4;UBERON:0004785,1.64e-19,4;UBERON:0000920,1.55e-14,3;UBERON:0000974,7.38e-08,10;UBERON:0000166,3.23e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.591534000199219,0.674338760312407,0.482022059766964,0.220587945464788,0.871517776369625,0,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.97550513735526,1.1240175325762,0.502644862058154,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.839910640994298,0.708875486211932,1.34337784054272,0.290633938513962,0.383382679165211,1.97065295158377,0.968532774145487,1.03664057770386,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0.802025881213139,0.552485933615378,0,0.182091168006717,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0,1.91419068741876,0.30347334256665,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.333698283423817,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0,0,1.19372242368845,0,0.307160702099232,2.98244294329889,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0.718946809178615,0,0,0,0,0,0,0.74214478529481,0,0,0.174919999992391,0,1.82069517256799,0.508507300585533,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0.295547618953547,1.09692698576986,0.21787692703798,0.83654246567162,0,0.113942055847001,0,0.269272933229316,2.17294743844016,2.23300811812344,1.09917112082235,1.06606955203727,0,0,0.498635045700469,0,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,2.10998064528027,1.30586246527318,0.282706142867882,1.29833183845255,0,0.530745387020035,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,1.04135843001079,3.03776431984571,0.435296032902013,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.678923115418936,0.0882561266915003,0,0,0,0.886351143382302,1.36885967914362,0.240476460754601,0,1.19885765749278,0,0.343609788497747,0.171594997861965,0,0,2.35694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.998395002494955,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.272406812223151,0,0.137539436597234,0,0,4.6428117273477,1.39723980313457,0,0.394028536495991,0.0524545881349981,0,0,0.575745591958336,0,0.662091970365432,0,0,1.72844298240254,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0.342173675768659,0.704815022316672,0,0,0,0,0.395223263795889,0.243585196761792,0.638341257770182,0,0,0,0.655745261419609,0.157054096250234,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0.617602894321944,0.219284049578707,0,0.771656153083659,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0.567515953566836,0,0.559518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| ||
|short_description=p10@NDFIP2 | |||
}} | }} |
Latest revision as of 02:25, 18 September 2015
Short description: | p10@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NDFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000218652_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | Q9NV92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.91e-17 | 20 |
chorionic membrane mesenchymal stem cell | 1.55e-14 | 3 |
endo-epithelial cell | 1.22e-13 | 42 |
corneal epithelial cell | 2.90e-10 | 2 |
endodermal cell | 3.29e-09 | 58 |
acinar cell | 4.27e-09 | 5 |
squamous epithelial cell | 1.67e-08 | 63 |
general ecto-epithelial cell | 3.10e-08 | 14 |
protein secreting cell | 1.19e-07 | 6 |
epithelial cell | 1.45e-07 | 253 |
acinar cell of salivary gland | 3.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.64e-19 | 4 |
respiratory system mucosa | 1.64e-19 | 4 |
egg chorion | 1.55e-14 | 3 |
neck | 7.38e-08 | 10 |
oral opening | 3.23e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.96e-16 | 14 |
clear cell adenocarcinoma | 1.29e-10 | 2 |
carcinoma | 5.86e-08 | 106 |
cell type cancer | 8.70e-07 | 143 |