FFCP PHASE1:Hg19::chr19:41086183..41086204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92799 | |EntrezGene=92799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19214 | |HGNC=19214 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc010xvn.1_5end | |association_with_transcript=28bp_to_uc010xvn.1_5end | ||
|cluster_id=chr19:41086183..41086204,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_9_at_SHKBP1_5end | |description=CAGE_peak_9_at_SHKBP1_5end | ||
|id=chr19:41086183..41086204,+ | |id=chr19:41086183..41086204,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.86e-115!42;CL:0000860!5.06e-107!45;CL:0000766!1.88e-94!76;CL:0002194!1.55e-79!63;CL:0000576!1.55e-79!63;CL:0000040!1.55e-79!63;CL:0000559!1.55e-79!63;CL:0002009!8.81e-77!65;CL:0000763!7.70e-71!112;CL:0000049!7.70e-71!112;CL:0000839!1.43e-70!70;CL:0000557!1.96e-69!71;CL:0000738!1.61e-56!140;CL:0000037!4.28e-51!172;CL:0000566!4.28e-51!172;CL:0002032!9.11e-48!165;CL:0000837!9.11e-48!165;CL:0000988!1.47e-47!182;CL:0002087!1.74e-47!119;CL:0002031!6.01e-39!124;CL:0000094!7.04e-25!8;CL:0002393!2.45e-19!9;CL:0002397!2.45e-19!9;CL:0000081!1.12e-17!11;CL:0000134!1.57e-17!358;CL:0002320!6.20e-17!365;CL:0000219!7.93e-15!390;CL:0000048!2.61e-12!430;CL:0000034!3.21e-12!444;CL:0000723!5.95e-12!436;CL:0000775!7.52e-11!3;CL:0000767!1.55e-09!3;CL:0000842!4.59e-09!3;CL:0000771!5.87e-08!2;CL:0000224!6.68e-07!4 | |ontology_enrichment_celltype=CL:0002057!1.86e-115!42;CL:0000860!5.06e-107!45;CL:0000766!1.88e-94!76;CL:0002194!1.55e-79!63;CL:0000576!1.55e-79!63;CL:0000040!1.55e-79!63;CL:0000559!1.55e-79!63;CL:0002009!8.81e-77!65;CL:0000763!7.70e-71!112;CL:0000049!7.70e-71!112;CL:0000839!1.43e-70!70;CL:0000557!1.96e-69!71;CL:0000738!1.61e-56!140;CL:0000037!4.28e-51!172;CL:0000566!4.28e-51!172;CL:0002032!9.11e-48!165;CL:0000837!9.11e-48!165;CL:0000988!1.47e-47!182;CL:0002087!1.74e-47!119;CL:0002031!6.01e-39!124;CL:0000094!7.04e-25!8;CL:0002393!2.45e-19!9;CL:0002397!2.45e-19!9;CL:0000081!1.12e-17!11;CL:0000134!1.57e-17!358;CL:0002320!6.20e-17!365;CL:0000219!7.93e-15!390;CL:0000048!2.61e-12!430;CL:0000034!3.21e-12!444;CL:0000723!5.95e-12!436;CL:0000775!7.52e-11!3;CL:0000767!1.55e-09!3;CL:0000842!4.59e-09!3;CL:0000771!5.87e-08!2;CL:0000224!6.68e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-124;33!CL:0002057;2.57e-124;33!CL:0000473;1.81e-83;39!CL:0000234;1.81e-83;39!CL:0000576;1.70e-68;48!CL:0000766;2.44e-50;69!CL:0000094;1.41e-29;8!CL:0000763;1.00e-22;100!CL:0000081;2.91e-21;11!CL:0000775;5.43e-16;3!CL:0002087;6.58e-16;104!CL:0000738;1.56e-13;136!CL:0000771;1.56e-11;2!CL:0002393;1.71e-07;6!CL:0002397;1.71e-07;6!CL:0000988;6.13e-07;177!CL:0000767;6.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-125,42;CL:0002057,2.93e-125,42;CL:0000473,9.73e-109,48;CL:0000234,9.73e-109,48;CL:0000766,6.35e-104,72;CL:0002194,1.33e-85,59;CL:0000576,1.33e-85,59;CL:0000040,1.33e-85,59;CL:0000559,1.33e-85,59;CL:0002009,1.29e-82,61;CL:0000839,6.28e-76,66;CL:0000557,1.04e-74,67;CL:0000763,3.66e-67,108;CL:0000049,3.66e-67,108;CL:0000738,6.54e-52,136;CL:0002032,9.72e-43,161;CL:0000837,9.72e-43,161;CL:0002087,7.08e-41,115;CL:0000037,1.18e-40,168;CL:0002031,6.80e-39,120;CL:0000988,3.23e-38,177;CL:0000094,1.29e-29,8;CL:0000081,2.74e-21,11;CL:0000775,4.91e-16,3;CL:0000134,2.62e-15,354;CL:0002320,7.37e-15,361;CL:0000219,2.80e-13,386;CL:0000771,1.56e-11,2;CL:0000048,2.42e-11,427;CL:0000723,4.48e-11,433;CL:0000034,9.92e-11,441;CL:0000767,6.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-90;42!CL:0000049;3.69e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.68e-63!102;UBERON:0003061!5.68e-63!102;UBERON:0002371!1.87e-60!80;UBERON:0002193!1.00e-58!112;UBERON:0001474!1.68e-55!86;UBERON:0004765!1.13e-45!101;UBERON:0001434!1.13e-45!101;UBERON:0002405!6.76e-43!115;UBERON:0003081!2.26e-23!216;UBERON:0002204!2.45e-23!167;UBERON:0002384!4.06e-16!375 | |ontology_enrichment_uberon=UBERON:0002390!5.68e-63!102;UBERON:0003061!5.68e-63!102;UBERON:0002371!1.87e-60!80;UBERON:0002193!1.00e-58!112;UBERON:0001474!1.68e-55!86;UBERON:0004765!1.13e-45!101;UBERON:0001434!1.13e-45!101;UBERON:0002405!6.76e-43!115;UBERON:0003081!2.26e-23!216;UBERON:0002204!2.45e-23!167;UBERON:0002384!4.06e-16!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.70e-65,76;UBERON:0001474,6.12e-60,82;UBERON:0004765,4.74e-54,90;UBERON:0002390,2.69e-52,98;UBERON:0003061,2.69e-52,98;UBERON:0002405,4.23e-52,93;UBERON:0001434,5.33e-48,100;UBERON:0002193,7.67e-47,108;UBERON:0002204,5.13e-26,167;UBERON:0003081,1.18e-21,203;UBERON:0002384,3.01e-14,371;UBERON:0000926,2.21e-11,315;UBERON:0004120,2.21e-11,315;UBERON:0006603,2.21e-11,315 | |||
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| ||
|short_description=p9@SHKBP1 | |short_description=p9@SHKBP1 | ||
}} | }} |
Latest revision as of 02:23, 18 September 2015
Short description: | p9@SHKBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHKBP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 28bp_to_uc010xvn.1_5end |
EntrezGene: | SHKBP1 |
HGNC: | 19214 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.70e-65 | 76 |
bone element | 6.12e-60 | 82 |
skeletal element | 4.74e-54 | 90 |
hematopoietic system | 2.69e-52 | 98 |
blood island | 2.69e-52 | 98 |
immune system | 4.23e-52 | 93 |
skeletal system | 5.33e-48 | 100 |
hemolymphoid system | 7.67e-47 | 108 |
musculoskeletal system | 5.13e-26 | 167 |
lateral plate mesoderm | 1.18e-21 | 203 |
connective tissue | 3.01e-14 | 371 |
mesoderm | 2.21e-11 | 315 |
mesoderm-derived structure | 2.21e-11 | 315 |
presumptive mesoderm | 2.21e-11 | 315 |