FFCP PHASE1:Hg19::chr2:68546759..68546770,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:68546759..68546770,-
|short_description=p5@CNRIP1
|description=CAGE_peak_5_at_CNRIP1_5end
|association_with_transcript=-227bp_to_ENST00000409559_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25927 | |EntrezGene=25927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24546 | |HGNC=24546 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-227bp_to_ENST00000409559_5end | |||
|cluster_id=chr2:68546759..68546770,- | |||
|description=CAGE_peak_5_at_CNRIP1_5end | |||
|id=chr2:68546759..68546770,- | |||
|ontology_enrichment_celltype=CL:0000055!1.77e-24!180;CL:0000057!3.33e-11!75;CL:0000680!4.63e-09!57;CL:0000056!4.63e-09!57;CL:0000355!4.63e-09!57;CL:0000183!4.78e-09!59;CL:0000187!1.02e-08!54;CL:0000222!1.31e-08!119;CL:0000393!8.29e-08!60;CL:0000211!8.29e-08!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-16!94;UBERON:0001016!2.15e-16!94;UBERON:0001017!3.08e-13!82;UBERON:0002616!3.14e-13!59;UBERON:0000955!4.00e-13!69;UBERON:0006238!4.00e-13!69;UBERON:0005743!5.73e-13!86;UBERON:0001049!9.82e-13!57;UBERON:0005068!9.82e-13!57;UBERON:0006241!9.82e-13!57;UBERON:0007135!9.82e-13!57;UBERON:0002346!6.74e-12!90;UBERON:0001893!9.40e-12!34;UBERON:0001869!1.40e-11!32;UBERON:0000475!3.43e-11!365;UBERON:0002791!3.64e-11!33;UBERON:0002020!3.73e-11!34;UBERON:0003528!3.73e-11!34;UBERON:0000914!5.94e-11!83;UBERON:0002329!5.94e-11!83;UBERON:0003077!5.94e-11!83;UBERON:0003059!5.94e-11!83;UBERON:0007282!5.94e-11!83;UBERON:0009618!5.94e-11!83;UBERON:0007285!5.94e-11!83;UBERON:0003075!1.03e-10!86;UBERON:0007284!1.03e-10!86;UBERON:0003080!3.16e-10!42;UBERON:0004290!3.29e-10!70;UBERON:0000119!5.51e-10!312;UBERON:0003056!5.82e-10!61;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0000483!1.59e-09!309;UBERON:0000033!1.64e-09!123;UBERON:0000924!7.48e-09!173;UBERON:0006601!7.48e-09!173;UBERON:0002619!8.42e-09!22;UBERON:0000956!1.25e-08!25;UBERON:0000203!1.25e-08!25;UBERON:0001134!1.35e-08!61;UBERON:0002036!1.35e-08!61;UBERON:0003082!1.35e-08!61;UBERON:0000153!1.48e-08!129;UBERON:0007811!1.48e-08!129;UBERON:0000477!3.14e-08!286;UBERON:0000025!3.20e-08!194;UBERON:0002385!3.40e-08!63;UBERON:0001015!3.40e-08!63;UBERON:0000383!3.40e-08!63;UBERON:0004111!4.31e-08!241;UBERON:0004121!5.70e-08!169;UBERON:0001950!7.47e-08!20;UBERON:0000486!1.65e-07!82;UBERON:0000468!2.01e-07!659;UBERON:0002049!2.43e-07!79;UBERON:0007798!2.43e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.18e-12;22!UBERON:0001950;1.17e-11;20!UBERON:0001869;1.21e-11;32!UBERON:0002791;9.76e-11;32!UBERON:0000956;1.58e-10;25!UBERON:0000203;1.58e-10;25!UBERON:0001893;3.58e-10;34!UBERON:0003528;1.71e-09;34!UBERON:0002020;1.71e-09;34!UBERON:0002780;3.37e-07;41!UBERON:0001890;3.37e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.46e-13,32;UBERON:0002619,2.26e-12,22;UBERON:0001893,2.75e-12,34;UBERON:0002791,1.12e-11,32;UBERON:0001950,1.23e-11,20;UBERON:0003528,9.52e-11,34;UBERON:0002020,9.52e-11,34;UBERON:0000956,1.61e-10,25;UBERON:0000203,1.61e-10,25;UBERON:0003056,1.68e-10,61;UBERON:0002780,1.98e-09,41;UBERON:0001890,1.98e-09,41;UBERON:0003080,1.98e-09,41;UBERON:0006240,1.98e-09,41;UBERON:0001016,4.56e-09,89;UBERON:0002346,6.56e-08,86;UBERON:0003075,8.33e-08,82;UBERON:0007284,8.33e-08,82;UBERON:0001017,4.30e-07,81;UBERON:0000955,8.60e-07,68;UBERON:0006238,8.60e-07,68 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,2.41077811209591,0,1.46379839637152,0.984968464614303,0.408001382488506,0.940364164434263,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,1.0843174571537,1.00267582127178,0.869079113764942,0,0,0.378139268656271,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.626984899610432,1.03366703667732,0.71153252537342,0.33472061276467,0.402829317109147,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0.673588117878509,0.563057402416611,0,0.949265659568129,0.732806975721629,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.622422070799533,0.942974704487816,0.326923806226917,0.302714855289863,1.15235184896,0.937285727335186,0.312160076830321,2.2818872861778,1.19558944441441,0.822041490506354,1.13311061057692,1.12360645361799,0.61246251376468,0.61417158655884,0.723280468230358,1.18800285728205,1.7308685049499,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0.877955241761676,0.612975591598039,0.600952235626387,0.340296549480063,0.358779271377724,0.640672166455702,0.211931901159562,0.600182192168805,0.721367704669072,0,1.11670113798954,0.337552664482532,0.292311015483596,0.252433774244115,0.552299391853796,0.646584227275248,0.710019185033229,0.503760491138201,1.01736355386293,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,1.3032332212413,0,1.44331342025273,0.463721619900307,0.117408694235822,0.866198686566443,1.38895653772983,0.380508304469197,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.968532774145487,1.03664057770386,0.576479813667846,0.75745460055828,0.444485260045183,0.381988425558278,0,0,0.514137463516618,0,0.857479297891735,0.336393253036082,1.30788020649984,0.4400297149257,0.904902010304444,0,0.845302752556,1.06375246633948,0,0.771622122786426,1.41849132023278,2.1313774321288,0.142977993658148,0,1.64648067356154,0.65147236858747,0,0,0,0,0.499864955910285,1.2162378064119,0.502257091432126,0,0.479249710983165,2.29723871668228,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0,0.76228387266739,0,0.773288812777695,1.34013012267479,0,0,0,0,0.49076596687656,0.500170521059677,1.35632511849868,0.415941723061614,0.535286966391485,0.315404830067869,0.35142424497814,0.902838299183157,2.27407504055985,1.03473071292505,0.664225598535437,0.553107505625109,0.173767228936166,1.37060810223918,1.02943027143257,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0.482561763430822,1.48418066444991,0.308419387605311,0.710246901252508,0.328508624055237,0.519254429183621,0.581051892299796,0,0,0,0.803701137152247,0.364182336013434,2.09799063935079,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,1.02056223165909,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0,1.28197250745681,0.577566499444116,0,0,1.6068392984416,0.773365746336976,0.770243085573222,0.767518373630648,0.551346289938122,0.322260734604821,0.725083469571143,0.681813019328807,0.712256285173899,0,0,0,0,1.39453664789186,0,0,0,1.06461206063404,1.73986598415015,0.55597265731176,0.286249773483982,1.116475108079,0.949138274156178,0.571890581771475,0.511795582622668,0.42793898803392,0.318203247925937,0,0.539617372749944,0.823611089208164,0.589062011728432,1.01091240786658,0,0.421258456238981,1.46290121726877,0,3.16950440270266,1.09199929126389,1.69686518344455,0,1.10273068709225,0.66343897524122,0.876901770507525,0.578775534266688,1.31178950409327,1.01455188481352,0.6196469961995,0,0,0.687743287091848,0.35667105148125,0.709522128141196,0.422215270595328,0.329294892959902,1.13841952129715,1.74967360122491,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,2.46174797895425,1.08182271390393,0.99921590399346,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.493217028184668,0,0,0,0.927680981618513,5.98841394003583,0,0,1.44999915086959,0,0,0,0.344743373241465,0,1.56262495439963,0.885741385813839,1.20596438625408,0,0.663475559587348,0.295547618953547,2.4132393686937,0,0,0.61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| ||
|short_description=p5@CNRIP1 | |||
}} | }} |
Latest revision as of 02:21, 18 September 2015
Short description: | p5@CNRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNRIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_ENST00000409559_5end |
EntrezGene: | CNRIP1 |
HGNC: | 24546 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.46e-13 | 32 |
regional part of cerebral cortex | 2.26e-12 | 22 |
telencephalon | 2.75e-12 | 34 |
regional part of telencephalon | 1.12e-11 | 32 |
neocortex | 1.23e-11 | 20 |
brain grey matter | 9.52e-11 | 34 |
gray matter | 9.52e-11 | 34 |
cerebral cortex | 1.61e-10 | 25 |
pallium | 1.61e-10 | 25 |
pre-chordal neural plate | 1.68e-10 | 61 |
regional part of forebrain | 1.98e-09 | 41 |
forebrain | 1.98e-09 | 41 |
anterior neural tube | 1.98e-09 | 41 |
future forebrain | 1.98e-09 | 41 |
nervous system | 4.56e-09 | 89 |
neurectoderm | 6.56e-08 | 86 |
neural plate | 8.33e-08 | 82 |
presumptive neural plate | 8.33e-08 | 82 |
central nervous system | 4.30e-07 | 81 |
brain | 8.60e-07 | 68 |
future brain | 8.60e-07 | 68 |