FFCP PHASE1:Hg19::chr5:52083958..52083976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3672 | |EntrezGene=3672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6134 | |HGNC=6134 | ||
|TSSclassifier=strong | |||
|UniProt=P56199 | |UniProt=P56199 | ||
|association_with_transcript=-159bp_to_NM_181501_5end | |association_with_transcript=-159bp_to_NM_181501_5end | ||
|cluster_id=chr5:52083958..52083976,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_6_at_ITGA1_5end | |description=CAGE_peak_6_at_ITGA1_5end | ||
|id=chr5:52083958..52083976,+ | |id=chr5:52083958..52083976,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.04e-13;13!CL:0000182;1.47e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.18e-11,15;CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.55e-13;11!UBERON:0009497;1.14e-10;13!UBERON:0004872;1.43e-08;7!UBERON:0003104;2.02e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.26e-12!155;UBERON:0001555!3.26e-12!155;UBERON:0007026!3.26e-12!155;UBERON:0004921!9.79e-12!129;UBERON:0004185!9.79e-12!129;UBERON:0000481!2.86e-11!347;UBERON:0007023!2.39e-10!115;UBERON:0004119!3.10e-10!169;UBERON:0000925!3.10e-10!169;UBERON:0006595!3.10e-10!169;UBERON:0000062!8.18e-10!511;UBERON:0003104!1.94e-09!238;UBERON:0009142!1.94e-09!238;UBERON:0003929!3.25e-09!54;UBERON:0000468!4.14e-09!659;UBERON:0009854!1.52e-08!23;UBERON:0000475!1.96e-08!365;UBERON:0000077!4.93e-08!130;UBERON:0009497!5.00e-08!25;UBERON:0000015!5.00e-08!25;UBERON:0002423!5.00e-08!25;UBERON:0006235!5.00e-08!25;UBERON:0004161!5.00e-08!25;UBERON:0008835!6.23e-08!22;UBERON:0003894!6.23e-08!22;UBERON:0002107!7.98e-08!19;UBERON:0006925!7.98e-08!19;UBERON:0008836!7.98e-08!19;UBERON:0002100!9.00e-08!216;UBERON:0009856!9.86e-08!26;UBERON:0001048!2.89e-07!168;UBERON:0005057!3.54e-07!26;UBERON:0007499!3.70e-07!25;UBERON:0000467!5.06e-07!625;UBERON:0000480!6.51e-07!626;UBERON:0000477!7.81e-07!286 | |ontology_enrichment_uberon=UBERON:0001007!3.26e-12!155;UBERON:0001555!3.26e-12!155;UBERON:0007026!3.26e-12!155;UBERON:0004921!9.79e-12!129;UBERON:0004185!9.79e-12!129;UBERON:0000481!2.86e-11!347;UBERON:0007023!2.39e-10!115;UBERON:0004119!3.10e-10!169;UBERON:0000925!3.10e-10!169;UBERON:0006595!3.10e-10!169;UBERON:0000062!8.18e-10!511;UBERON:0003104!1.94e-09!238;UBERON:0009142!1.94e-09!238;UBERON:0003929!3.25e-09!54;UBERON:0000468!4.14e-09!659;UBERON:0009854!1.52e-08!23;UBERON:0000475!1.96e-08!365;UBERON:0000077!4.93e-08!130;UBERON:0009497!5.00e-08!25;UBERON:0000015!5.00e-08!25;UBERON:0002423!5.00e-08!25;UBERON:0006235!5.00e-08!25;UBERON:0004161!5.00e-08!25;UBERON:0008835!6.23e-08!22;UBERON:0003894!6.23e-08!22;UBERON:0002107!7.98e-08!19;UBERON:0006925!7.98e-08!19;UBERON:0008836!7.98e-08!19;UBERON:0002100!9.00e-08!216;UBERON:0009856!9.86e-08!26;UBERON:0001048!2.89e-07!168;UBERON:0005057!3.54e-07!26;UBERON:0007499!3.70e-07!25;UBERON:0000467!5.06e-07!625;UBERON:0000480!6.51e-07!626;UBERON:0000477!7.81e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.34e-15;19!UBERON:0006925;5.34e-15;19!UBERON:0000160;1.60e-13;17!UBERON:0002423;2.00e-12;25!UBERON:0005409;6.39e-12;22!UBERON:0000059;1.86e-10;11!UBERON:0001155;6.96e-10;9!UBERON:0004921;4.65e-08;33!UBERON:0002368;7.28e-08;33!UBERON:0002365;1.88e-07;31!UBERON:0002330;1.88e-07;31!UBERON:0006947;2.43e-07;3!UBERON:0004054;2.43e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.70e-15,19;UBERON:0006925,3.70e-15,19;UBERON:0008836,3.70e-15,19;UBERON:0009854,7.11e-14,23;UBERON:0004921,7.47e-14,118;UBERON:0005409,1.15e-13,25;UBERON:0000160,1.26e-13,17;UBERON:0008835,1.34e-12,22;UBERON:0003894,1.34e-12,22;UBERON:0009497,1.50e-12,25;UBERON:0000015,1.50e-12,25;UBERON:0002423,1.50e-12,25;UBERON:0006235,1.50e-12,25;UBERON:0004161,1.50e-12,25;UBERON:0001007,2.34e-12,145;UBERON:0001555,2.34e-12,145;UBERON:0007026,2.34e-12,145;UBERON:0002417,5.10e-12,60;UBERON:0000916,5.10e-12,60;UBERON:0009856,7.94e-12,26;UBERON:0004119,7.23e-11,160;UBERON:0000925,7.23e-11,160;UBERON:0006595,7.23e-11,160;UBERON:0007499,1.14e-10,25;UBERON:0000059,1.52e-10,11;UBERON:0001155,5.62e-10,9;UBERON:0009569,6.15e-10,112;UBERON:0002100,1.23e-09,199;UBERON:0005172,3.72e-09,54;UBERON:0005173,3.72e-09,54;UBERON:0002365,5.89e-08,31;UBERON:0002330,5.89e-08,31;UBERON:0003104,6.84e-08,160;UBERON:0009142,6.84e-08,160;UBERON:0002368,8.61e-08,35;UBERON:0007023,1.14e-07,114;UBERON:0006947,2.60e-07,3;UBERON:0004054,2.60e-07,3;UBERON:0003929,3.07e-07,54;UBERON:0005256,3.15e-07,122 | |||
|phase1_expression=2.18014055124668,1.49870366723688,2.11431606143957,3.00219895059391,2.23480547213644,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0,0.286836620748814,0,0,1.06748995729705,0.98667019366864,0.311211035399766,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0,0,0.554128230968366,0.438977620880838,0.30648779579902,1.80285670687916,0.453728732640084,1.07633781413317,2.34913127700424,0.211931901159562,0.300091096084402,0.412210116953756,0.515281080091258,0.744467425326359,0.675105328965065,0.194874010322397,0.504867548488229,0.736399189138395,0,2.13005755509969,0.503760491138201,0,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,0.928735856063958,0.721879481669586,0.828147600278907,0.842923450390509,0.241011029883482,0.772057809126758,0.871517776369625,0.474541238222193,0.808987848960987,0.784885860501384,1.53898862778556,0,0,0.4115740113314,0,6.33775174109154,6.87979051674338,7.08947888017685,0,0.245976877086227,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0.87192013766656,0.07333828582095,3.49033632546,0,0,2.6593811658487,0,0,0,0,3.28849385413739,0.542621605391443,0,0.325736184293735,3.55391948742546,0,0,0,0.399891964728228,0,0,0,1.4377491329495,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,3.11956292296211,0.713715955188647,1.26161932027148,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,1.99500565274481,1.12264037773229,0.768834895534206,2.04682899626681,0.965123526861645,0,0,0.177561725313127,0.246381468041427,0,0,0.362578348774867,0,0,0.459257792658427,0,1.96686622439136,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,7.72807587357917,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0.37064843820784,0.429374660225974,0.372158369359667,1.58189712359363,2.66882271493355,0,0,0,0,2.69808686374972,1.92175920815238,1.17812402345686,0.404364963146632,1.58510321173008,0,0,0.487426979262569,0,0.682499557039929,0.707027159768564,0,0,0,0.876901770507525,0,0,1.21746226177622,0.30982349809975,0,0.430234056612155,1.57198465620994,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.852408440419239,0,0.296964680832639,0,0,0,0.445234820091624,0,0,4.5827037297746,2.21027132424918,0.755798243562828,0.102268682502155,0,3.42143546427988,0.0898683511473268,0.179021174675609,0,24.7594948148703,0,2.22273980289274,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0.10893846351899,0,4.54006525172403,3.41826167541004,0,0.0897576444097721,0,0.31900115973192,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,8.95735737970654,9.46495940185729,9.16545217400438,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,9.07544126553598,3.62972148145992,0,1.5796644907122,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,5.41652671550293,0,0.483781656445426,0.584714536689484,0.821154570532092,9.31094558288826,0,0.677942222341597,0.274083849293502,0.19871461170299,0.189932387867636,0,0.160317640503067,3.41524791582964,0.19980960958213,0,0,0.343189995723929,0,0.248505071130865,0,0,0.209205692624666,0.101998217636322,0,0,0,0,2.14882720709979,0,0.837847203816763,4.12488763221031,0.717873024576814,0.199679000498991,0,0.89268582976749,1.74677028465488,1.80149941771202,0,2.59984501613838,2.55489160981616,2.29172049104229,2.36225955635397,0,0,0,0,0,0,0,0,0.242998226632099,0,1.57611414598396,1.10154635083496,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,1.58636928128176,6.88795498286987,7.95041333473328,0.129282956361551,0.26446520348538,1.02652102730598,0,2.99004755189545,2.04365596629566,0.414239055347196,1.48849806543585,0,0,0,5.98419583706421,2.7575888342497,3.06345576763462,2.29510841496863,0,0.886068179966986,0,0.1251909307065,0,0.443716206147409,0.310482014706917,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| ||
|short_description=p6@ITGA1 | |short_description=p6@ITGA1 | ||
}} | }} |
Latest revision as of 02:20, 18 September 2015
Short description: | p6@ITGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGA1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -159bp_to_NM_181501_5end |
EntrezGene: | ITGA1 |
HGNC: | 6134 |
UniProt: | P56199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.18e-11 | 15 |
hepatocyte | 1.33e-09 | 12 |