FFCP PHASE1:Hg19::chr13:79979919..79979945,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:79979919..79979945,- to FFCP PHASE1:Hg19::chr13:79979919..79979945,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64062 | |EntrezGene=64062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20327 | |HGNC=20327 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8P6 | |UniProt=Q5T8P6 | ||
|association_with_transcript=0bp_to_ENST00000267229,NM_022118,uc001vky.2,uc001vkz.2,uc001vla.2,uc001vlc.1_5end | |||
|cluster_id=chr13:79979919..79979945,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_RBM26_5end | |||
|id=chr13:79979919..79979945,- | |||
|ontology_enrichment_celltype=CL:0000542!3.27e-15!53;CL:0000051!3.27e-15!53;CL:0000838!1.13e-14!52;CL:0000037!4.73e-14!172;CL:0000566!4.73e-14!172;CL:0002032!1.56e-13!165;CL:0000837!1.56e-13!165;CL:0000988!1.37e-12!182;CL:0000738!4.06e-12!140;CL:0002031!7.63e-10!124;CL:0000945!2.63e-09!24;CL:0000826!2.63e-09!24;CL:0002087!3.80e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.69e-10;24!CL:0000542;1.39e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.56e-16,53;CL:0000051,7.56e-16,53;CL:0000838,3.19e-15,52;CL:0000037,1.13e-13,168;CL:0000988,2.68e-13,177;CL:0002032,5.99e-13,161;CL:0000837,5.99e-13,161;CL:0000945,2.43e-11,24;CL:0000826,2.43e-11,24;CL:0000738,1.14e-10,136;CL:0002031,2.83e-08,120;CL:0002087,1.11e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.39e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.28e-07,51;DOID:0060083,5.28e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@RBM26 | |||
}} | }} |
Latest revision as of 02:17, 18 September 2015
Short description: | p3@RBM26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBM26_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000267229, NM_022118, uc001vky.2, uc001vkz.2, uc001vla.2, uc001vlc.1_5end |
EntrezGene: | RBM26 |
HGNC: | 20327 |
UniProt: | Q5T8P6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.56e-16 | 53 |
common lymphoid progenitor | 7.56e-16 | 53 |
lymphoid lineage restricted progenitor cell | 3.19e-15 | 52 |
hematopoietic stem cell | 1.13e-13 | 168 |
hematopoietic cell | 2.68e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.99e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.99e-13 | 161 |
lymphocyte of B lineage | 2.43e-11 | 24 |
pro-B cell | 2.43e-11 | 24 |
leukocyte | 1.14e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.83e-08 | 120 |
nongranular leukocyte | 1.11e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.28e-07 | 51 |
immune system cancer | 5.28e-07 | 51 |