FFCP PHASE1:Hg19::chr2:68479554..68479559,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:68479554..68479559,- to FFCP PHASE1:Hg19::chr2:68479554..68479559,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5534 | |EntrezGene=5534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9317 | |HGNC=9317 | ||
|TSSclassifier=strong | |||
|UniProt=P63098 | |UniProt=P63098 | ||
|association_with_transcript=91bp_to_NM_000945,uc002sei.1_5end | |||
|cluster_id=chr2:68479554..68479559,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_PPP3R1_5end | |||
|id=chr2:68479554..68479559,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.58e-09;3!CL:0000097;6.83e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.62e-09,3;CL:0000097,2.24e-08,5;CL:0002028,2.24e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-24!115;UBERON:0003080!3.28e-12!42;UBERON:0001049!3.37e-12!57;UBERON:0005068!3.37e-12!57;UBERON:0006241!3.37e-12!57;UBERON:0007135!3.37e-12!57;UBERON:0002619!3.46e-12!22;UBERON:0002616!4.65e-12!59;UBERON:0002020!8.61e-12!34;UBERON:0003528!8.61e-12!34;UBERON:0001869!1.01e-11!32;UBERON:0001893!1.05e-11!34;UBERON:0000955!1.21e-11!69;UBERON:0006238!1.21e-11!69;UBERON:0002780!1.39e-11!41;UBERON:0001890!1.39e-11!41;UBERON:0006240!1.39e-11!41;UBERON:0001017!1.49e-11!82;UBERON:0002791!3.77e-11!33;UBERON:0001950!5.51e-11!20;UBERON:0005743!2.09e-10!86;UBERON:0000956!4.72e-10!25;UBERON:0000203!4.72e-10!25;UBERON:0000073!4.05e-09!94;UBERON:0001016!4.05e-09!94;UBERON:0003101!8.20e-08!22;UBERON:0000079!8.20e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.81e-13;22!UBERON:0001950;6.23e-12;20!UBERON:0000956;3.83e-11;25!UBERON:0000203;3.83e-11;25!UBERON:0001869;3.80e-10;32!UBERON:0001893;1.29e-09;34!UBERON:0007023;2.93e-09;114!UBERON:0003528;3.94e-09;34!UBERON:0002020;3.94e-09;34!UBERON:0002791;7.43e-09;32!UBERON:0002780;5.58e-07;41!UBERON:0001890;5.58e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-29,114;UBERON:0002619,9.04e-13,22;UBERON:0001950,9.66e-12,20;UBERON:0001869,3.31e-11,32;UBERON:0000956,5.60e-11,25;UBERON:0000203,5.60e-11,25;UBERON:0001893,2.23e-10,34;UBERON:0003528,2.43e-10,34;UBERON:0002020,2.43e-10,34;UBERON:0000955,4.11e-10,68;UBERON:0006238,4.11e-10,68;UBERON:0000073,4.82e-10,53;UBERON:0002616,4.82e-10,53;UBERON:0002791,1.44e-09,32;UBERON:0002780,1.51e-09,41;UBERON:0001890,1.51e-09,41;UBERON:0003080,1.51e-09,41;UBERON:0006240,1.51e-09,41;UBERON:0001049,2.75e-09,56;UBERON:0005068,2.75e-09,56;UBERON:0006241,2.75e-09,56;UBERON:0007135,2.75e-09,56;UBERON:0001017,9.72e-08,81;UBERON:0001016,2.13e-07,89;UBERON:0000200,5.98e-07,6;UBERON:0003075,9.66e-07,82;UBERON:0007284,9.66e-07,82 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,1.34088328328186,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0,0,0.154934401160603,0,0.293600439334847,0,0.601633342410425,0.217010870715852,0.671746422719773,0.647787332037959,2.31818010870768,0.872389432677388,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.376484679085209,1.09162460023138,0.224723484445085,0,1.28371610830437,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0.59675003159727,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0,1.5905718941022,0,0,0,0.087834785693126,0.851363990735132,0,0,0,0,0.26591592103773,0,0,0.371457501329565,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,0,0,0,0,0,2.63560834872127,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,1.1409436430889,0,0,0.323745888736263,0.280901613404497,0.204154171254893,0,0.206651562351531,4.75201142912821,0.741800787835671,0,0,0,0,0.554128230968366,0,0.30648779579902,0.901428353439581,0,0,0.213557388818567,0,0,0.618315175430633,0,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.508681776931463,0.966304265816484,1.09098448236334,0.573609190778008,0,0.265059536642971,0.232387885739037,0.518305275076852,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0.658501712451753,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.268675568108545,0,0,0.492663237895943,1.76096868026452,1.86595303986695,1.44119953416961,1.51490920111656,0.126995788584338,0.763976851116555,0,1.71072446022705,0.514137463516618,0,0.857479297891735,0.224262168690721,0,0.1466765716419,0.258543431515556,0,0,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0.76228387266739,0,0,0.167516265334349,0,8.23907726341901,8.97484377612075,24.8649308061621,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.368738337083406,0.347534457872331,0.587403472388222,0.686286847621712,0.413536052245775,0.862856803274467,0.320182673410333,0.606255142892519,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,1.55776328755086,0.116210378459959,0.966875596732978,1.00253235151642,0.920809889358963,0.229628896329213,0.182091168006717,1.04899531967539,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.75169719801128,0.366277859273374,0,0,0.650060246036521,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.356128142586949,0.661139661443912,0.384380134730212,0.127612712494584,1.0115778085555,0,0.62962469366128,1.3940745403212,0,0,0,0.55597265731176,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0.989838023675989,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,1.08890984861323,0.753150406214233,0,0,0,0,1.01489521846434,1.52927441428475,1.70894156152249,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,1.90460633053462,0.121360521749513,0.445773537109913,0,0,0,0,0,0.703347082052564,0,0,0,0.398495976502139,3.03912307084262,0,0,0.123084805461069,0,0,0,0,1.38100767891707,0,0,3.87733098438087,2.59750674853184,1.99613798001194,0.260427761085233,0,3.62499787717397,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,1.10579259931225,0.295547618953547,0.87754158861589,0.10893846351899,0.278847488557207,1.46205491157214,0.113942055847001,0.69169171316418,0.538545866458633,0.108647371922008,0,0.732780747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| ||
|short_description=p6@PPP3R1 | |||
}} | }} |
Latest revision as of 02:12, 18 September 2015
Short description: | p6@PPP3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPP3R1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 91bp_to_NM_000945, uc002sei.1_5end |
EntrezGene: | PPP3R1 |
HGNC: | 9317 |
UniProt: | P63098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.62e-09 | 3 |
mast cell | 2.24e-08 | 5 |
basophil mast progenitor cell | 2.24e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.07e-29 | 114 |
regional part of cerebral cortex | 9.04e-13 | 22 |
neocortex | 9.66e-12 | 20 |
cerebral hemisphere | 3.31e-11 | 32 |
cerebral cortex | 5.60e-11 | 25 |
pallium | 5.60e-11 | 25 |
telencephalon | 2.23e-10 | 34 |
brain grey matter | 2.43e-10 | 34 |
gray matter | 2.43e-10 | 34 |
brain | 4.11e-10 | 68 |
future brain | 4.11e-10 | 68 |
regional part of nervous system | 4.82e-10 | 53 |
regional part of brain | 4.82e-10 | 53 |
regional part of telencephalon | 1.44e-09 | 32 |
regional part of forebrain | 1.51e-09 | 41 |
forebrain | 1.51e-09 | 41 |
anterior neural tube | 1.51e-09 | 41 |
future forebrain | 1.51e-09 | 41 |
neural tube | 2.75e-09 | 56 |
neural rod | 2.75e-09 | 56 |
future spinal cord | 2.75e-09 | 56 |
neural keel | 2.75e-09 | 56 |
central nervous system | 9.72e-08 | 81 |
nervous system | 2.13e-07 | 89 |
gyrus | 5.98e-07 | 6 |
neural plate | 9.66e-07 | 82 |
presumptive neural plate | 9.66e-07 | 82 |