FFCP PHASE1:Hg19::chr21:31744583..31744589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337959 | |EntrezGene=337959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18923 | |HGNC=18923 | ||
|TSSclassifier=strong | |||
|UniProt=Q52LG2 | |UniProt=Q52LG2 | ||
|association_with_transcript=-26bp_to_ENST00000399889,NM_181621,uc002ynz.3_5end | |association_with_transcript=-26bp_to_ENST00000399889,NM_181621,uc002ynz.3_5end | ||
|cluster_id=chr21:31744583..31744589,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_1_at_KRTAP13-2_5end | |description=CAGE_peak_1_at_KRTAP13-2_5end | ||
|id=chr21:31744583..31744589,- | |id=chr21:31744583..31744589,- | ||
|ontology_enrichment_celltype=CL:0002566!3.17e-15!1 | |ontology_enrichment_celltype=CL:0002566!3.17e-15!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.05e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |||
|ontology_enrichment_disease=DOID:1909!1.86e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.55e-15;2!DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.74e-15,2;DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!3.01e-20!3;UBERON:0001033!3.01e-20!3;UBERON:0010056!3.01e-20!3;UBERON:0007029!6.44e-16!1;UBERON:0001042!1.75e-13!10;UBERON:0009145!1.75e-13!10;UBERON:0006562!2.58e-12!11;UBERON:0008814!3.49e-09!15;UBERON:0001557!2.32e-07!19;UBERON:0000161!8.80e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.64e-38;3!UBERON:0001033;1.64e-38;3!UBERON:0007029;9.99e-30;1!UBERON:0001003;1.56e-08;15!UBERON:0007376;1.56e-08;15!UBERON:0000014;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.49e-38,3;UBERON:0001033,1.49e-38,3;UBERON:0010056,1.49e-38,3;UBERON:0007029,9.99e-30,1;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0001003,1.59e-08,15;UBERON:0007376,1.59e-08,15;UBERON:0007383,1.59e-08,15;UBERON:0000014,1.82e-08,4;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19 | |||
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|short_description=p1@KRTAP13-2 | |short_description=p1@KRTAP13-2 | ||
}} | }} |
Latest revision as of 02:02, 18 September 2015
Short description: | p1@KRTAP13-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP13-2_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -26bp_to_ENST00000399889, NM_181621, uc002ynz.3_5end |
EntrezGene: | KRTAP13-2 |
HGNC: | 18923 |
UniProt: | Q52LG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.49e-38 | 3 |
gustatory system | 1.49e-38 | 3 |
future tongue | 1.49e-38 | 3 |
surface | 9.99e-30 | 1 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
skin epidermis | 1.59e-08 | 15 |
outer epithelium | 1.59e-08 | 15 |
enveloping layer of ectoderm | 1.59e-08 | 15 |
zone of skin | 1.82e-08 | 4 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.74e-15 | 2 |
cervical cancer | 4.79e-07 | 5 |