FFCP PHASE1:Hg19::chr17:7751337..7751346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=473bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7751337..7751346,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_21_at_KDM6B_5end | |||
|id=chr17:7751337..7751346,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-19!42;CL:0000860!1.13e-17!45;CL:0000557!4.63e-12!71;CL:0002009!1.03e-11!65;CL:0002031!3.04e-11!124;CL:0000738!7.36e-11!140;CL:0000766!9.50e-11!76;CL:0000839!3.43e-10!70;CL:0002194!4.47e-10!63;CL:0000576!4.47e-10!63;CL:0000040!4.47e-10!63;CL:0000559!4.47e-10!63;CL:0002087!1.05e-09!119;CL:0002032!5.27e-08!165;CL:0000837!5.27e-08!165;CL:0000037!9.36e-08!172;CL:0000566!9.36e-08!172;CL:0000763!3.22e-07!112;CL:0000049!3.22e-07!112;CL:0000988!3.38e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.29e-39;33!CL:0002057;9.29e-39;33!CL:0000473;4.66e-33;39!CL:0000234;4.66e-33;39!CL:0000576;5.77e-17;48!CL:0000766;2.01e-16;69!CL:0000763;1.42e-08;100!CL:0000738;4.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.45e-34,42;CL:0002057,1.45e-34,42;CL:0000473,4.27e-30,48;CL:0000234,4.27e-30,48;CL:0000766,2.35e-27,72;CL:0000839,2.06e-25,66;CL:0000557,5.12e-25,67;CL:0002194,7.87e-24,59;CL:0000576,7.87e-24,59;CL:0000040,7.87e-24,59;CL:0000559,7.87e-24,59;CL:0002009,5.07e-23,61;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0000738,3.44e-16,136;CL:0002031,7.49e-16,120;CL:0002087,5.55e-14,115;CL:0002032,1.99e-13,161;CL:0000837,1.99e-13,161;CL:0000037,8.45e-13,168;CL:0000988,4.60e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.25e-10!80;UBERON:0002390!6.23e-09!102;UBERON:0003061!6.23e-09!102;UBERON:0001474!1.61e-08!86;UBERON:0002405!1.26e-07!115;UBERON:0002193!2.38e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.26e-22,76;UBERON:0001474,3.05e-20,82;UBERON:0004765,2.46e-18,90;UBERON:0002405,1.05e-17,93;UBERON:0002390,9.78e-17,98;UBERON:0003061,9.78e-17,98;UBERON:0001434,2.24e-16,100;UBERON:0002193,4.59e-15,108;UBERON:0002204,5.77e-11,167;UBERON:0003081,2.58e-07,203 | |||
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| ||
|short_description=p21@KDM6B | |||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p21@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 473bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.45e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-34 | 42 |
defensive cell | 4.27e-30 | 48 |
phagocyte | 4.27e-30 | 48 |
myeloid leukocyte | 2.35e-27 | 72 |
myeloid lineage restricted progenitor cell | 2.06e-25 | 66 |
granulocyte monocyte progenitor cell | 5.12e-25 | 67 |
monopoietic cell | 7.87e-24 | 59 |
monocyte | 7.87e-24 | 59 |
monoblast | 7.87e-24 | 59 |
promonocyte | 7.87e-24 | 59 |
macrophage dendritic cell progenitor | 5.07e-23 | 61 |
myeloid cell | 8.12e-18 | 108 |
common myeloid progenitor | 8.12e-18 | 108 |
leukocyte | 3.44e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 7.49e-16 | 120 |
nongranular leukocyte | 5.55e-14 | 115 |
hematopoietic oligopotent progenitor cell | 1.99e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-13 | 161 |
hematopoietic stem cell | 8.45e-13 | 168 |
hematopoietic cell | 4.60e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.26e-22 | 76 |
bone element | 3.05e-20 | 82 |
skeletal element | 2.46e-18 | 90 |
immune system | 1.05e-17 | 93 |
hematopoietic system | 9.78e-17 | 98 |
blood island | 9.78e-17 | 98 |
skeletal system | 2.24e-16 | 100 |
hemolymphoid system | 4.59e-15 | 108 |
musculoskeletal system | 5.77e-11 | 167 |
lateral plate mesoderm | 2.58e-07 | 203 |