FFCP PHASE1:Hg19::chr17:7750893..7750904,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_uc002gix.2_5end | |association_with_transcript=29bp_to_uc002gix.2_5end | ||
|cluster_id=chr17:7750893..7750904,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_17_at_KDM6B_5end | |description=CAGE_peak_17_at_KDM6B_5end | ||
|id=chr17:7750893..7750904,+ | |id=chr17:7750893..7750904,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.27e-35!45;CL:0002057!1.62e-34!42;CL:0000766!1.46e-29!76;CL:0000557!3.12e-25!71;CL:0000839!3.95e-24!70;CL:0002009!1.71e-23!65;CL:0002194!6.40e-23!63;CL:0000576!6.40e-23!63;CL:0000040!6.40e-23!63;CL:0000559!6.40e-23!63;CL:0000763!6.14e-20!112;CL:0000049!6.14e-20!112;CL:0000738!1.19e-16!140;CL:0000988!1.75e-13!182;CL:0002031!2.27e-13!124;CL:0002032!2.32e-13!165;CL:0000837!2.32e-13!165;CL:0000037!5.81e-13!172;CL:0000566!5.81e-13!172;CL:0002087!1.63e-12!119 | |ontology_enrichment_celltype=CL:0000860!2.27e-35!45;CL:0002057!1.62e-34!42;CL:0000766!1.46e-29!76;CL:0000557!3.12e-25!71;CL:0000839!3.95e-24!70;CL:0002009!1.71e-23!65;CL:0002194!6.40e-23!63;CL:0000576!6.40e-23!63;CL:0000040!6.40e-23!63;CL:0000559!6.40e-23!63;CL:0000763!6.14e-20!112;CL:0000049!6.14e-20!112;CL:0000738!1.19e-16!140;CL:0000988!1.75e-13!182;CL:0002031!2.27e-13!124;CL:0002032!2.32e-13!165;CL:0000837!2.32e-13!165;CL:0000037!5.81e-13!172;CL:0000566!5.81e-13!172;CL:0002087!1.63e-12!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-65;33!CL:0002057;2.61e-65;33!CL:0000473;9.51e-46;39!CL:0000234;9.51e-46;39!CL:0000576;6.88e-32;48!CL:0000766;1.12e-21;69!CL:0000775;1.55e-13;3!CL:0000763;1.48e-12;100!CL:0000094;3.92e-11;8!CL:0002087;2.35e-09;104!CL:0000738;2.39e-08;136!CL:0000081;3.07e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.76e-55,42;CL:0002057,2.76e-55,42;CL:0000766,3.08e-49,72;CL:0000473,4.36e-48,48;CL:0000234,4.36e-48,48;CL:0000839,1.90e-38,66;CL:0002194,5.31e-38,59;CL:0000576,5.31e-38,59;CL:0000040,5.31e-38,59;CL:0000559,5.31e-38,59;CL:0000557,7.61e-38,67;CL:0002009,1.07e-36,61;CL:0000763,4.22e-32,108;CL:0000049,4.22e-32,108;CL:0000738,5.56e-25,136;CL:0002032,1.07e-20,161;CL:0000837,1.07e-20,161;CL:0002031,3.76e-20,120;CL:0000037,1.01e-19,168;CL:0000988,1.40e-18,177;CL:0002087,1.79e-18,115;CL:0000775,1.09e-13,3;CL:0000094,3.17e-11,8;CL:0000081,2.64e-08,11;CL:0000134,8.02e-08,354;CL:0002320,1.31e-07,361;CL:0000219,7.32e-07,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;9.25e-40;42!CL:0000049;2.01e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.80e-22!102;UBERON:0003061!1.80e-22!102;UBERON:0002371!4.90e-21!80;UBERON:0001474!5.96e-20!86;UBERON:0002193!3.26e-19!112;UBERON:0004765!3.17e-15!101;UBERON:0001434!3.17e-15!101;UBERON:0002405!2.28e-14!115;UBERON:0002204!9.19e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.80e-22!102;UBERON:0003061!1.80e-22!102;UBERON:0002371!4.90e-21!80;UBERON:0001474!5.96e-20!86;UBERON:0002193!3.26e-19!112;UBERON:0004765!3.17e-15!101;UBERON:0001434!3.17e-15!101;UBERON:0002405!2.28e-14!115;UBERON:0002204!9.19e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.94e-33,76;UBERON:0001474,1.49e-30,82;UBERON:0004765,1.21e-27,90;UBERON:0002405,1.11e-26,93;UBERON:0002390,3.32e-25,98;UBERON:0003061,3.32e-25,98;UBERON:0001434,1.18e-24,100;UBERON:0002193,1.18e-22,108;UBERON:0002204,9.05e-14,167;UBERON:0003081,7.37e-11,203;UBERON:0002384,2.55e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,0.929716147622738,2.46700732813095,1.54853185447552,2.8769239232215,3.07392847834921,0.945928919554341,0.344745680736619,3.87290810150296,0,2.07066573496865,1.09162460023138,0.898893937780338,2.44867113896722,0.641858054152187,5.11469700639233,0,0.997318288108159,0.426224750532694,3.77272010217159,2.8369261234557,6.85104473895132,1.25624332628372,2.60741459210101,0.868755378820466,1.21079900526674,1.47311054395026,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,27.5891413221728,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,1.30139853857622,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,0.929716147622738,2.46700732813095,1.54853185447552,2.8769239232215,3.07392847834921,0.945928919554341,0.344745680736619,3.87290810150296,0,2.07066573496865,1.09162460023138,0.898893937780338,2.44867113896722,0.641858054152187,5.11469700639233,0,0.997318288108159,0.426224750532694,3.77272010217159,2.8369261234557,6.85104473895132,1.25624332628372,2.60741459210101,0.868755378820466,1.21079900526674,1.47311054395026,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,27.5891413221728,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,1.30139853857622,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@KDM6B | |short_description=p17@KDM6B | ||
}} | }} |
Latest revision as of 01:48, 18 September 2015
Short description: | p17@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 29bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.76e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.76e-55 | 42 |
myeloid leukocyte | 3.08e-49 | 72 |
defensive cell | 4.36e-48 | 48 |
phagocyte | 4.36e-48 | 48 |
myeloid lineage restricted progenitor cell | 1.90e-38 | 66 |
monopoietic cell | 5.31e-38 | 59 |
monocyte | 5.31e-38 | 59 |
monoblast | 5.31e-38 | 59 |
promonocyte | 5.31e-38 | 59 |
granulocyte monocyte progenitor cell | 7.61e-38 | 67 |
macrophage dendritic cell progenitor | 1.07e-36 | 61 |
myeloid cell | 4.22e-32 | 108 |
common myeloid progenitor | 4.22e-32 | 108 |
leukocyte | 5.56e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 3.76e-20 | 120 |
hematopoietic stem cell | 1.01e-19 | 168 |
hematopoietic cell | 1.40e-18 | 177 |
nongranular leukocyte | 1.79e-18 | 115 |
neutrophil | 1.09e-13 | 3 |
granulocyte | 3.17e-11 | 8 |
blood cell | 2.64e-08 | 11 |
mesenchymal cell | 8.02e-08 | 354 |
connective tissue cell | 1.31e-07 | 361 |
motile cell | 7.32e-07 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.94e-33 | 76 |
bone element | 1.49e-30 | 82 |
skeletal element | 1.21e-27 | 90 |
immune system | 1.11e-26 | 93 |
hematopoietic system | 3.32e-25 | 98 |
blood island | 3.32e-25 | 98 |
skeletal system | 1.18e-24 | 100 |
hemolymphoid system | 1.18e-22 | 108 |
musculoskeletal system | 9.05e-14 | 167 |
lateral plate mesoderm | 7.37e-11 | 203 |
connective tissue | 2.55e-07 | 371 |