FFCP PHASE1:Hg19::chr17:7750864..7750874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002gix.2_5end | |association_with_transcript=0bp_to_uc002gix.2_5end | ||
|cluster_id=chr17:7750864..7750874,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_20_at_KDM6B_5end | |description=CAGE_peak_20_at_KDM6B_5end | ||
|id=chr17:7750864..7750874,+ | |id=chr17:7750864..7750874,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.56e-30!42;CL:0000860!1.81e-29!45;CL:0000766!6.55e-24!76;CL:0000839!6.15e-22!70;CL:0000557!1.78e-21!71;CL:0002194!2.35e-19!63;CL:0000576!2.35e-19!63;CL:0000040!2.35e-19!63;CL:0000559!2.35e-19!63;CL:0002009!1.82e-18!65;CL:0002031!3.47e-15!124;CL:0000738!9.63e-15!140;CL:0000763!1.82e-13!112;CL:0000049!1.82e-13!112;CL:0002087!1.22e-12!119;CL:0002032!2.97e-11!165;CL:0000837!2.97e-11!165;CL:0000037!2.79e-10!172;CL:0000566!2.79e-10!172;CL:0000988!1.33e-09!182 | |ontology_enrichment_celltype=CL:0002057!2.56e-30!42;CL:0000860!1.81e-29!45;CL:0000766!6.55e-24!76;CL:0000839!6.15e-22!70;CL:0000557!1.78e-21!71;CL:0002194!2.35e-19!63;CL:0000576!2.35e-19!63;CL:0000040!2.35e-19!63;CL:0000559!2.35e-19!63;CL:0002009!1.82e-18!65;CL:0002031!3.47e-15!124;CL:0000738!9.63e-15!140;CL:0000763!1.82e-13!112;CL:0000049!1.82e-13!112;CL:0002087!1.22e-12!119;CL:0002032!2.97e-11!165;CL:0000837!2.97e-11!165;CL:0000037!2.79e-10!172;CL:0000566!2.79e-10!172;CL:0000988!1.33e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.91e-48;33!CL:0002057;9.91e-48;33!CL:0000473;3.66e-39;39!CL:0000234;3.66e-39;39!CL:0000576;1.78e-21;48!CL:0000766;1.19e-14;69!CL:0000763;7.56e-11;100!CL:0000738;7.75e-08;136!CL:0002087;3.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.31e-42,48;CL:0000234,4.31e-42,48;CL:0000860,4.88e-42,42;CL:0002057,4.88e-42,42;CL:0000766,4.02e-35,72;CL:0000839,7.16e-34,66;CL:0000557,2.44e-33,67;CL:0002194,3.17e-33,59;CL:0000576,3.17e-33,59;CL:0000040,3.17e-33,59;CL:0000559,3.17e-33,59;CL:0002009,4.43e-32,61;CL:0000763,1.11e-22,108;CL:0000049,1.11e-22,108;CL:0002031,1.18e-17,120;CL:0000738,1.64e-17,136;CL:0002087,4.68e-16,115;CL:0002032,2.14e-14,161;CL:0000837,2.14e-14,161;CL:0000037,1.09e-13,168;CL:0000988,7.36e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.09e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.74e-18!102;UBERON:0003061!5.74e-18!102;UBERON:0002371!7.46e-18!80;UBERON:0001474!6.88e-17!86;UBERON:0002193!2.77e-15!112;UBERON:0004765!9.80e-14!101;UBERON:0001434!9.80e-14!101;UBERON:0002405!3.18e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-29,76;UBERON:0002390,1.86e-28,98;UBERON:0003061,1.86e-28,98;UBERON:0001474,7.08e-27,82;UBERON:0002193,1.32e-25,108;UBERON:0004765,2.68e-24,90;UBERON:0002405,1.92e-23,93;UBERON:0001434,1.20e-21,100;UBERON:0003081,4.81e-14,203;UBERON:0002204,5.33e-12,167;UBERON:0000926,5.15e-08,315;UBERON:0004120,5.15e-08,315;UBERON:0006603,5.15e-08,315 | |||
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| ||
|short_description=p20@KDM6B | |short_description=p20@KDM6B | ||
}} | }} |
Latest revision as of 01:48, 18 September 2015
Short description: | p20@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.31e-42 | 48 |
phagocyte | 4.31e-42 | 48 |
classical monocyte | 4.88e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-42 | 42 |
myeloid leukocyte | 4.02e-35 | 72 |
myeloid lineage restricted progenitor cell | 7.16e-34 | 66 |
granulocyte monocyte progenitor cell | 2.44e-33 | 67 |
monopoietic cell | 3.17e-33 | 59 |
monocyte | 3.17e-33 | 59 |
monoblast | 3.17e-33 | 59 |
promonocyte | 3.17e-33 | 59 |
macrophage dendritic cell progenitor | 4.43e-32 | 61 |
myeloid cell | 1.11e-22 | 108 |
common myeloid progenitor | 1.11e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 1.18e-17 | 120 |
leukocyte | 1.64e-17 | 136 |
nongranular leukocyte | 4.68e-16 | 115 |
hematopoietic oligopotent progenitor cell | 2.14e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-14 | 161 |
hematopoietic stem cell | 1.09e-13 | 168 |
hematopoietic cell | 7.36e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-29 | 76 |
hematopoietic system | 1.86e-28 | 98 |
blood island | 1.86e-28 | 98 |
bone element | 7.08e-27 | 82 |
hemolymphoid system | 1.32e-25 | 108 |
skeletal element | 2.68e-24 | 90 |
immune system | 1.92e-23 | 93 |
skeletal system | 1.20e-21 | 100 |
lateral plate mesoderm | 4.81e-14 | 203 |
musculoskeletal system | 5.33e-12 | 167 |
mesoderm | 5.15e-08 | 315 |
mesoderm-derived structure | 5.15e-08 | 315 |
presumptive mesoderm | 5.15e-08 | 315 |